Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02078 ATGGTTGTGCCTTCTCCTTCTCCAACTTCTATCAAGACAAGTTACAAGAAAAAGAAGACGATAATAAAAATTCCAACGATAGACCTATCCATGGAAAGGACAGAGTTGTCGGAAACAGTGGTGAAAGCCTGCGAGGAATACGGCTTCTTCAAGGTTGTTAACCACAATGTTCCGAAGGAGGTTATTGCAAGAATGGAAGAAGAGGGTGCAGAGTTTTTTGGCAAAGCCACCTACGAGAAGCGTGGAGCTGGCCCAGCAAGTCCTTTCGGTTATGGCTTCAGCAATATCGGGCCCAACGGAGATATGGGTGACCTAGAGTATCTTCTGCTTCATGCTAACCCTCTTTCCGTCTCTGAGAGATCCAAAACCATCGCTAATGACTCCACCAAGTTCAGTTGTGTTGTGAATGATTATGTAGAAGCAGTAAAAGAAGTAACGTGCGAGATTTTAGATCTGGTGGTTGAGGGATTAGGGGTCCCAGACAAGTTCGCACTAAGCAGGCTCATTAGAGATGTGAATAGTGATTCAGTTCTGAGGATCAATCACTACCCTCCATTGAACCAGAAGGTGAAGGGCAACAAGAATAGCATTGGTTTTGGGGCGCATTCTGACCCTCAGATCTTGACCATCATGCGGTCCAATGACGTGGGTGGGCTTCAAATTTACACCCGTGATGGGTTGTGGATTCCTGTCCCTCCTGACCCCAATCAATTCTTTGTCATGGTGGGTGATGTCTTCCAGGTTTTGACAAATGGAAAGTTCATGAGTGTGAGGCACAGGGCATTAACCAACACATTGAAGGCAAGGATGTCAATGATGTACTTTGCAGCACCACCACTTGATTGGTGGATCACTCCGCTACCCAAGATGGTGTCACCACCACAAAATCCAAGTCTATATAAGCCCTTCACATGGGCCCAGTACAAGAAAGCAACATATTCCTTACGCCTCGGAGATTCTCGACTTGATCTCTTCAAGGCCCAGCTAGATACCCATCATGTATCTGCCTCTCCATCACAAATTCAATGTTAG 1032 0.4603 MVVPSPSPTSIKTSYKKKKTIIKIPTIDLSMERTELSETVVKACEEYGFFKVVNHNVPKEVIARMEEEGAEFFGKATYEKRGAGPASPFGYGFSNIGPNGDMGDLEYLLLHANPLSVSERSKTIANDSTKFSCVVNDYVEAVKEVTCEILDLVVEGLGVPDKFALSRLIRDVNSDSVLRINHYPPLNQKVKGNKNSIGFGAHSDPQILTIMRSNDVGGLQIYTRDGLWIPVPPDPNQFFVMVGDVFQVLTNGKFMSVRHRALTNTLKARMSMMYFAAPPLDWWITPLPKMVSPPQNPSLYKPFTWAQYKKATYSLRLGDSRLDLFKAQLDTHHVSASPSQIQC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02078 343 SUPERFAMILY Clavaminate synthase-like 15 319 - -
Gma19g02078 343 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 97 IPR026992 -
Gma19g02078 343 Pfam 2OG-Fe(II) oxygenase superfamily 175 277 IPR044861 -
Gma19g02078 343 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 173 278 IPR005123 -
Gma19g02078 343 Gene3D - 3 316 IPR027443 -
Gma19g02078 343 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 328 - -
Gma19g02078 343 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 6 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02078 Gma-Chr19 49675015 49681443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02078 17 326 Glycosyltransferase AT5G59530 28.528 2.13e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02078 K04125 - gmx:100777233 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02078 19 49675015 49681443 Gma19g02078 19 49675015 49681443 ECH
Gma19g02078 19 49675015 49681443 Gma03g02041 03 45993233 45997967 GST
Gma19g02078 19 49675015 49681443 Gma10g00103 10 1020530 1024830 PCT
Gma19g02078 19 49675015 49681443 Gma02g00097 02 989472 993718 PCT
Gma10g00103 10 1020530 1024830 Gma19g02078 19 49675015 49681443 PCT
Gma02g00097 02 989472 993718 Gma19g02078 19 49675015 49681443 PCT