Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00103 ATGGTTGCGCCTTGTCCAACATCCATGATGGTAAGAACCAAGAAAACAAAGGCCATGGGAGTTCCGACAATAGACCTTTCAATGGAAAGGTCCAAGTTGTCGGAACTGGTGGTGAAAGCATGTGAGGAATATGGTTTCTTCAAGGTGGTGAACCACAGTGTGCAAAAAGAGGTCATTGCAAGATTGGAAGAGGAGGGAAAGGAGTTTTTCTCCAAAACCTCCTCGGAGAAGCGCCAAGCTGGCCCTGCCAATCCTTTTGGCTATGGTTGCAGAAATATTGGCCCCAATGGCGATATGGGTCACCTCGAGTATCTCCTCCTTCATACCAACCCTCTTTCCATATCTGAGAGATCCAAAACCATAGCAAATGACCCTACTAAGTTCAGTTGTGCCGTGAATGATTACATAGAAGCAGTTAAAGAACTAACATGTGAGGTTCTCGATATGGTGGAGGAGGGTTTGTGGGTCCAAGACAAGTTCTCACTCAGCAAGCTCATCAGAGACGTCCATAGTGACTCACTCCTAAGGATCAATCAATACCCTCCCGTGAGCCTAAAGGGCACCAAGAATTGGGACACGTCCAAACTTGAGGCACATCAACTCCAGAGCCAAAATAATAATAACAACAACAACAATATTGGCTTTGGAGAGCATTCTGACCCTCAGATCTTGACCATCATGCGGTCCAACAACGTTGATGGCCTTCAGATTTCCACCCACGATGGCTTGTGGATCCCTGTCCCCCCTGACCCCAATGAATTCTTCGTTATGGTTGGTGATGCCTTGCAGGTTTTGACAAATGGAAGGTTTGTAAGCGTGAGACACAGGGTGTTGACGAACACAACAAAGGCCAGAATGTCAATGATGTACTTTGCAGCACCACCGCTGAATTGGTGGATCACTCCACTGCCGAAGATGGTGACACCCCACAATCCAAGTCTCTATAAGCCCTTCACCTGGGCCCAATACAAGCAGGCAGCATATTCTCTAAGATTGGGAGACGCTCGCCTTGACCTCTTCAAGATCCAACGACAACAAGATACCCATCTCATCGCACCTGCTTCAACCTGA 1071 0.4753 MVAPCPTSMMVRTKKTKAMGVPTIDLSMERSKLSELVVKACEEYGFFKVVNHSVQKEVIARLEEEGKEFFSKTSSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSISERSKTIANDPTKFSCAVNDYIEAVKELTCEVLDMVEEGLWVQDKFSLSKLIRDVHSDSLLRINQYPPVSLKGTKNWDTSKLEAHQLQSQNNNNNNNNIGFGEHSDPQILTIMRSNNVDGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFVSVRHRVLTNTTKARMSMMYFAAPPLNWWITPLPKMVTPHNPSLYKPFTWAQYKQAAYSLRLGDARLDLFKIQRQQDTHLIAPAST 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00103 356 Gene3D - 3 331 IPR027443 -
Gma10g00103 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
Gma10g00103 356 Pfam 2OG-Fe(II) oxygenase superfamily 204 293 IPR044861 -
Gma10g00103 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 302 IPR005123 -
Gma10g00103 356 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 343 - -
Gma10g00103 356 SUPERFAMILY Clavaminate synthase-like 6 334 - -
Gma10g00103 356 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 343 - -
Gma10g00103 356 PRINTS Isopenicillin N synthase signature 37 54 - -
Gma10g00103 356 PRINTS Isopenicillin N synthase signature 218 239 - -
Gma10g00103 356 PRINTS Isopenicillin N synthase signature 254 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00103 Gma-Chr10 1020530 1024830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00103 12 342 Glycosyltransferase AT5G59530 25.364 6.34e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00103 K04125 - gmx:100779525 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00103 10 1020530 1024830 Gma10g00103 10 1020530 1024830 ECH
Gma10g00103 10 1020530 1024830 Gma02g00097 02 989472 993718 GST
Gma19g02078 19 49675015 49681443 Gma10g00103 10 1020530 1024830 PCT
Gma03g02041 03 45993233 45997967 Gma10g00103 10 1020530 1024830 PCT
Gma10g00103 10 1020530 1024830 Gma19g02078 19 49675015 49681443 PCT
Gma10g00103 10 1020530 1024830 Gma03g02041 03 45993233 45997967 PCT