Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02041 ATGGTTGTGCTTTCTCCTTCTCCAACTTCCATCAAGACAAGCTACAAGAAAAAAAAGACAATGAAAATTCCAACGATAGACCTATCCATGGAAAGGACAGAGTTGTCGGAAACAGTGGTGAAAGCCTGCGAGGAATACGGTTTCTTCAAGGTGATTAACCACAATGTTCCGAAGGAGGTTATTGCAAGAATGGAAGAGGAGGGTGCAAAGTTTTTCGCCAAACCCACCCACGAGAAGCGTCGAGCTGGCCCAGCAAGTCCTTTCGGTTATGGCTTCACCAATATCGGGCCCAACGGAGATAAGGGTGACCTAGAGTATCTCTTGCTTCATGCCAACCCTCTTTCCGTCTCTCAGAGATCCAAAACCATCGCTAGTGACTCCACCAAGTTCAGTTGTGTTGTGAATGATTATGTAGAAGCAGTGAAAGAAGTAACGTGTGAGATTTTAGATCTGGTGCTTGAGGGATTAGGAGTCCCAGAGAAGTTTGCACTAAGCAAGCTCATTAGAGATGTTAATAGTGATTGTGTTCTAAGGATCAATCACTACCCTCCATTGAACCAGAAGTTGAAGGGCAACAAGAATAGCATTGGTTTTGGGGCGCATTCTGACCCTCAGATCTTGACAATCATGCGTTCCAATGACGTGGGTGGGCTTCAAATTTACACCCGTGAAGGGTTGTGGATTCCTATCCCTCCTGACCCCAATCAATTCTTTGTCATGGTGGGCGATGTCTTCCAGGTTTTGACAAATGGAAAGTTCATGAGTGTGAGGCACAGGGCATTAACCAACACATTGGGGGCAAGGATGTCAATGATGTACTTTGCAGCACCACCACTTGATTGGTGGATCACTCCGCTAGCCAAGATGGTGTCACCACCACAAAATCCAAGTCTATATAAGCCCTTCACATGGGACCACTACAAGAAGGCAACATATTCCTTACGCCTCGGAGATTCTCGACTTGATCTCTTCAAGGCCCAGCTAGATACCCATCATGTATCTGTCTCTCCATCACAAATTCAATGTTAA 1029 0.4568 MVVLSPSPTSIKTSYKKKKTMKIPTIDLSMERTELSETVVKACEEYGFFKVINHNVPKEVIARMEEEGAKFFAKPTHEKRRAGPASPFGYGFTNIGPNGDKGDLEYLLLHANPLSVSQRSKTIASDSTKFSCVVNDYVEAVKEVTCEILDLVLEGLGVPEKFALSKLIRDVNSDCVLRINHYPPLNQKLKGNKNSIGFGAHSDPQILTIMRSNDVGGLQIYTREGLWIPIPPDPNQFFVMVGDVFQVLTNGKFMSVRHRALTNTLGARMSMMYFAAPPLDWWITPLAKMVSPPQNPSLYKPFTWDHYKKATYSLRLGDSRLDLFKAQLDTHHVSVSPSQIQC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02041 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 172 277 IPR005123 -
Gma03g02041 342 Gene3D - 4 315 IPR027443 -
Gma03g02041 342 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 6 327 - -
Gma03g02041 342 Pfam non-haem dioxygenase in morphine synthesis N-terminal 23 99 IPR026992 -
Gma03g02041 342 SUPERFAMILY Clavaminate synthase-like 11 318 - -
Gma03g02041 342 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 327 - -
Gma03g02041 342 Pfam 2OG-Fe(II) oxygenase superfamily 174 276 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02041 Gma-Chr3 45993233 45997967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02041 21 325 Glycosyltransferase AT5G59530 27.760 7.39e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02041 K04125 - gmx:100796690 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02041 03 45993233 45997967 Gma03g02041 03 45993233 45997967 ECH
Gma19g02078 19 49675015 49681443 Gma03g02041 03 45993233 45997967 GST
Gma03g02041 03 45993233 45997967 Gma10g00103 10 1020530 1024830 PCT
Gma03g02041 03 45993233 45997967 Gma02g00097 02 989472 993718 PCT
Gma10g00103 10 1020530 1024830 Gma03g02041 03 45993233 45997967 PCT
Gma02g00097 02 989472 993718 Gma03g02041 03 45993233 45997967 PCT