Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00097 atggttgccccttgtccaacatccatgaTGGTAAGAACCAAGAAAACAAAGGCCATGGGAGTTCCGACGATAGACCTTTCCCTGGAAAGATCGAAGTTGGCAGAACTAGTGGTGAAAGCATGTGAGGAATACGGTTTCTTCAAGGTGGTGAATCACAGTGTGCCAAAGGAGGTTATTGCAAGATTGGAAGAGGAGGGAAAGGAGTTTTTCTCCAAAACCTCCTCGGAGAAGCGCCAAGCTGGCCCTGCCAATCCTTTTGGCTATGGCTGCAGAAATATTGGCCCCAATGGTGATATGGGTCACCTCGAGTATCTCCTCCTTCATACCAATCCTCTTTCTATATCTGAGAGATCCAAAACCATAGCAAAAGACCCTACTAAGTTCAGTTGTGTCGTGAATGATTACATAGAAGCAGCTAAGGAACTAACATGTGAGCTTCTTGATCTGGTGGCGGAGGGTTTGTGGGTCCAAGACAAATTCTCACTCAGCAAGCTCATCAGAGACGTTCATAGTGACTCACTTCTAAGGATCAATCAATACCCTCCCGTGAGCCTAAAGGGCACCAAGAATTGGGACACGTCCAAAGTTGAGGCACGTCAAATCCAGAGCCAAAATAATAACAACAACAACAACAACAACATTGGCTTTGGAGAGCATTCTGACCCTCAGATCTTGACCATCATGCGGTCCAACAACGTTGATGGCCTTCAGATTTCCACCCACGATGGCTTGTGGATCCCTGTCCCCCCTGACCCCAATGAATTCTTCGTTATGGTTGGCGATGCCTTGCAGGTTTTGACAAATGGAAGGTTTGCAAGCGTGAGACACAGGGTGTTGACGAACACAACAAAGGCCAGAATGTCAATGATGTACTTTGCAGCACCACCGCTGAATAGGTGGATCACTCCACTGCCAATGATGGTGACACCCCACAATCCAAGTCTCTATAAGCCCTTTACGTGGGCCCAATACAAGCAAGCAGCATACTCTCTAAGATTGGGAGACGCTCGCCTTGACCTCTTCAAGATCCAACGACAACAAGATACCCATCTCGCACCTGCTTCTCCCTGA 1071 0.4641 MVAPCPTSMMVRTKKTKAMGVPTIDLSLERSKLAELVVKACEEYGFFKVVNHSVPKEVIARLEEEGKEFFSKTSSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSISERSKTIAKDPTKFSCVVNDYIEAAKELTCELLDLVAEGLWVQDKFSLSKLIRDVHSDSLLRINQYPPVSLKGTKNWDTSKVEARQIQSQNNNNNNNNNIGFGEHSDPQILTIMRSNNVDGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFASVRHRVLTNTTKARMSMMYFAAPPLNRWITPLPMMVTPHNPSLYKPFTWAQYKQAAYSLRLGDARLDLFKIQRQQDTHLAPASP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00097 356 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 344 - -
Gma02g00097 356 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 344 - -
Gma02g00097 356 Gene3D - 3 332 IPR027443 -
Gma02g00097 356 SUPERFAMILY Clavaminate synthase-like 6 335 - -
Gma02g00097 356 Pfam 2OG-Fe(II) oxygenase superfamily 207 294 IPR044861 -
Gma02g00097 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 295 IPR005123 -
Gma02g00097 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
Gma02g00097 356 PRINTS Isopenicillin N synthase signature 37 54 - -
Gma02g00097 356 PRINTS Isopenicillin N synthase signature 219 240 - -
Gma02g00097 356 PRINTS Isopenicillin N synthase signature 255 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00097 Gma-Chr2 989472 993718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00097 12 343 Glycosyltransferase AT5G59530 25.581 2.54e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00097 K04125 - gmx:100809097 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00097 02 989472 993718 Gma02g00097 02 989472 993718 ECH
Gma10g00103 10 1020530 1024830 Gma02g00097 02 989472 993718 GST
Gma19g02078 19 49675015 49681443 Gma02g00097 02 989472 993718 PCT
Gma03g02041 03 45993233 45997967 Gma02g00097 02 989472 993718 PCT
Gma02g00097 02 989472 993718 Gma19g02078 19 49675015 49681443 PCT
Gma02g00097 02 989472 993718 Gma03g02041 03 45993233 45997967 PCT