Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02047 ATGGCGGTTACTACTCACACTCTATCTGCCACAGAAAAGAAACACTGGTGGCTTACCAACCGAAAGATTGTTGAGAAATACATTAAGGATGCAAGGAGCTTAATAGCGACGCAAGATCAGAGCGAGATAGCTTCGGCTCTGAACCTTCTAGATGCGGCTCTGGCGATTTCTCCGAGGTTTGACCAAGCGCTTGAGTTGAGAGCAAGGGCGTTGCTCTATTTGCGGCGGTTCAAGGAGGTTGCTGATATGCTTCAGGACTACATTCCGAGCCTGAGAATGGGAAACGATGACTCATCATCGTCTTCTTCTGACAGCTCTCAGCAACTTTCGAGGGAGGGAGTGAAGCTTCTCTCTTCTTCCTCGGAGTCTCCGGTGAGGGATCATAGTTTCAAGTGCTTCTCTGTGTCTGACCTCAAGAAGAAGGTCATGGCAGGACTATGTAAAACTTGCGACAAGGAAGGGCAATGGAGATACTTGGTGTTGGGTGAAGCATGCTGCCACCTAGGCCTAATGGAGGATGCAATGGTTCTTCTTCAAACGGGGAAACGCATTGCAAGCGCCGCATTCCGGCGCGAGAGTGTGTGCTGGTCGGAAGACAGCTTTTGTGTTACCAATATACCCTTCTCCGGCGATTCCACAAACGCGCCACCCTCAACTCCGCCGCGAACCCTTCTCGCAGACTCCGAGAGCGTGGCCCAACTCCTCGGCCACATAAAGTTCCTCCTCCGCCGCCGCGCCGCTGCACTCGCCGCCCTCGACGCTGGACTCTACTCGGAGGCCGTCCGCCACTTCTCCAAAATCGTCGACGGCCGCCGCAGCGCGCCGCAGAGCTTCCTCGCTGAGTGCTACATGCACCGCGCCTCCGCGCACCGTTCCGCCGGCAGAATCGCAGAATCAATCGCCGATTGCAACCGTACGCTCGCATTAGACCCCACTTGCATCCAAGCACTCGAAACCAGAGCTTCACTCTTCGAAACAATTCGCTGTTTACCAGATTCTCTTCACGACCTCGAACACTTGAAGCTTCTCTACAACTCAATCTTGCGTGATCGCAAGCTTCCAGGTCCTGCGTGGAAGCGCCACAACGTGCGATACAGAGAAATTCCAGGGAAACTCTGCGCCCTCACTATTAAAATTCAGGAACTTAAACAGAGGTTGGCTTCTGGTGAAACCGGGAATGTGGATTACTATGCTTTGATTGGTGTCCGACGAGGATGTTCCCGGTCGGAGTTGGAGAGGGCACACTTGTTGCTTTCCTTGCGGCACAAGCCTGATAAGGCAACTGGGTTCATCGAAAGGTGCGAGCTTGCGGATGAGCGTGATGTTGAGTCTGTTAAAGAGAGGGTGAAGATGTCGTCGTTGTTGTTATATAGATTGGTTCAGAAGGGTTACACTAATGTCATGGGTAACATTATGGATGAGGAAGCTGCTGAGAAGCAGAGAAAGAAGGCTGCTTTGCAAGCTATTCAAGCACAGAAAGAGAAAGCCAATGAAGCTGCTGAGCTGAATAAGGTCGTTGAGAGTAATAGGAGCAGCGTGGAGAATACTAATACTAATAATACTCAAAATAGGTCTATGGTGTCTTCTTCTACTGTGAATCCGGCGGTGTTTCAGGGTGTTTTCTGCCGCGATCTTACGGTGGTGGGGAACTTGCTTTCTCAGGCGGGGTTTAACCGGTCCATGCCGGTGAAGTATGAAGCGTTGAGCTGTTGA 1713 0.5166 MAVTTHTLSATEKKHWWLTNRKIVEKYIKDARSLIATQDQSEIASALNLLDAALAISPRFDQALELRARALLYLRRFKEVADMLQDYIPSLRMGNDDSSSSSSDSSQQLSREGVKLLSSSSESPVRDHSFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSEDSFCVTNIPFSGDSTNAPPSTPPRTLLADSESVAQLLGHIKFLLRRRAAALAALDAGLYSEAVRHFSKIVDGRRSAPQSFLAECYMHRASAHRSAGRIAESIADCNRTLALDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTIKIQELKQRLASGETGNVDYYALIGVRRGCSRSELERAHLLLSLRHKPDKATGFIERCELADERDVESVKERVKMSSLLLYRLVQKGYTNVMGNIMDEEAAEKQRKKAALQAIQAQKEKANEAAELNKVVESNRSSVENTNTNNTQNRSMVSSSTVNPAVFQGVFCRDLTVVGNLLSQAGFNRSMPVKYEALSC 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02047 570 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 570 - -
Gma19g02047 570 MobiDBLite consensus disorder prediction 507 527 - -
Gma19g02047 570 Gene3D Tetratricopeptide repeat domain 221 353 IPR011990 GO:0005515
Gma19g02047 570 Gene3D DnaJ domain 381 530 IPR036869 -
Gma19g02047 570 PANTHER - 1 570 - -
Gma19g02047 570 SUPERFAMILY Chaperone J-domain 391 429 IPR036869 -
Gma19g02047 570 Coils Coil 472 509 - -
Gma19g02047 570 SMART tpr_5 280 313 IPR019734 GO:0005515
Gma19g02047 570 SUPERFAMILY TPR-like 246 341 IPR011990 GO:0005515
Gma19g02047 570 CDD DnaJ 395 429 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02047 Gma-Chr19 49387280 49390522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02047 - - gmx:100808420 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02047 19 49387280 49390522 Gma19g02047 19 49387280 49390522 ECH
Gma19g02047 19 49387280 49390522 Gma03g02012 03 45725423 45728722 GST
Gma19g02047 19 49387280 49390522 Gma10g00133 10 1279942 1283100 PCT
Gma19g02047 19 49387280 49390522 Gma02g00129 02 1250991 1253911 PCT
Gma10g00133 10 1279942 1283100 Gma19g02047 19 49387280 49390522 PCT
Gma02g00129 02 1250991 1253911 Gma19g02047 19 49387280 49390522 PCT