Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00133 ATGGCCGTGACCACTCCCTGTATCAATGCCACAGAAAAGAAGCACTGGTGGCTCACCAACCGAAAGATCGTAGAGAAATACATGAGAGACGCTCGGAGTCTGATAGCGACGCAGGAACAGAGCGAGATCGGTTCGGCGCTGAACCTTCTCGACGCGGCTCTGGCGATCTATCCGCGGCTGGACGAAGCGCTGGAGCTGAGAGCGAGGTGTCTGCTATATCTGAGAAGGTTCAAGGACGTGGCGGATATGCTTCAGGACTACATTCCGAGCCTGAGAATGGCGAACAACGACGACTCTGGTTCTTCTGTTTCTTCGGATAGTTCGCTTTCGAGGGAAGGTGTCAAGCTTCTCCCTTCCTCCGATTCCGATCAGAGTTTCAAGTGCTTCTCTGTCTCTGACTTGAAGAAGAAGGTTATGGCAGGGCTGTGTAAAACTTGCAACAACGAAGGGTATTGGAGATACTTGGTTCTGGGGAAAGCATGTTGCCACCTAGGCCTAATGGAAGACGCCATGGTCCTTCTCCAAACCGGCAAACGTCTAGCCACCGCCGCCTTCCGCCGAGAgAGCGTTTGCTGGTCCGACGACAGCTTCTCCCTCTCCAACCCCCTCTTCTCCGGCGACACCCCCACCACCCCACCCCCGGAGTCCGAAGCCGTCACCCAACTCCTCGCTCACATTAAGCTCCTCCTCCGCCGCCGCGCCGCCGCCCTCGCCGCCATTGATGCCGGCCTCCACTCTGAAGCCATCCGCCACTTCTCCAAAATCCTCGAGGGCCGCCGCGGCGCCCCTCAGGGCTTCCTCGCAGAGTGCTACATGCACAGAGCCTCCGCAAACCGCTCCGCCGGGCGAATCGCCGACTCAATCGCCGACTGCAACCGAACCCTCGCCCTGGACCCCACCAGCATCCAAGCCCTCGAAACCCGAGCCTCACTCTTCGAATCCATTCGCTGCTTCCCAGACTCCCTCCACGACCTCGAACACCTCAAGCTCCTCTACAACACCATCCTCCGCGACCGCAAGCTCGCGGGCCCCACCTGGAAGCAGTTGCGCCACCACAACAACCTGCGCTACAGAGAAATCCCAGGAAAGCTCTGCGCCCTCACCGTAAAAACACAAGAACTCAAACAGAGGATCGCTTCCGGGGACACCGGGAACGTCGACTACTACTCGCTCATCGGATTGCGGCGCGGTTGTGGGCGTTCGGAGCTGCAGAGGGCTCATTTGTTGCTGTGTCTGAAACACAAACCCGACAAGGCCACGTGTTTCGTCGAACGGTGCGAGCTGGCGGACGAGCGCGACCTCGACTCGGTTAAGGAAAGGGCGAAAATGTCGGCGCTGTTGCTCTACAGGCTGCTCCAGAAGGGTTACACAAACGTGATGGGAACCATCATGGATGAGGAAGCCGCTGAGAAACAGAGGAAGAAGGTTCTAGAAGCTCAAGTATTGATGAGTAATGAGAATTTGGAAGACAAGAAGTGCAACGTTTCCTCGCCTTCGACGGCGAACCCCTCTGTCTATCAGGGAGTGTTTTGCCGCGATATTGCGGTGGTTGGGAACTTGCTTTCGCAATCGGGGTTCAACCGCTCCATTCCGGTGAAGTACGAGGCGTTGAGCTGCTGA 1620 0.5735 MAVTTPCINATEKKHWWLTNRKIVEKYMRDARSLIATQEQSEIGSALNLLDAALAIYPRLDEALELRARCLLYLRRFKDVADMLQDYIPSLRMANNDDSGSSVSSDSSLSREGVKLLPSSDSDQSFKCFSVSDLKKKVMAGLCKTCNNEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLATAAFRRESVCWSDDSFSLSNPLFSGDTPTTPPPESEAVTQLLAHIKLLLRRRAAALAAIDAGLHSEAIRHFSKILEGRRGAPQGFLAECYMHRASANRSAGRIADSIADCNRTLALDPTSIQALETRASLFESIRCFPDSLHDLEHLKLLYNTILRDRKLAGPTWKQLRHHNNLRYREIPGKLCALTVKTQELKQRIASGDTGNVDYYSLIGLRRGCGRSELQRAHLLLCLKHKPDKATCFVERCELADERDLDSVKERAKMSALLLYRLLQKGYTNVMGTIMDEEAAEKQRKKVLEAQVLMSNENLEDKKCNVSSPSTANPSVYQGVFCRDIAVVGNLLSQSGFNRSIPVKYEALSC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00133 539 MobiDBLite consensus disorder prediction 96 123 - -
Gma10g00133 539 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 539 - -
Gma10g00133 539 Gene3D Tetratricopeptide repeat domain 17 491 IPR011990 GO:0005515
Gma10g00133 539 PANTHER - 1 539 - -
Gma10g00133 539 SUPERFAMILY TPR-like 235 331 IPR011990 GO:0005515
Gma10g00133 539 SUPERFAMILY Chaperone J-domain 383 421 IPR036869 -
Gma10g00133 539 CDD DnaJ 387 420 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00133 Gma-Chr10 1279942 1283100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00133 - - gmx:100780225 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00133 10 1279942 1283100 Gma10g00133 10 1279942 1283100 ECH
Gma10g00133 10 1279942 1283100 Gma02g00129 02 1250991 1253911 GST
Gma19g02047 19 49387280 49390522 Gma10g00133 10 1279942 1283100 PCT
Gma03g02012 03 45725423 45728722 Gma10g00133 10 1279942 1283100 PCT
Gma10g00133 10 1279942 1283100 Gma19g02047 19 49387280 49390522 PCT
Gma10g00133 10 1279942 1283100 Gma03g02012 03 45725423 45728722 PCT