Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00129 ATGGCCGTGACCACTCCCTGTCTCAATGCCACAGAAAAGAAGCACTGGTGGCTTACCAACAGAAAGATCGTAGAGAAATACATGAGAGACGCTCGGAGTCTGATAGCGACGCAGGAACAGAGCGAGATCGCTTCAGCGCTGAACCTTCTCGACGCGGCTCTGGCGATCTATCCGCGGCTCGACGAAGCGCTGGAGCTGAGAGCGAGGTCGCTGCTGTATCTGAGAAGGTTCAAAGACGTGGCGGATATGCTTCAGGACTACATTCCGAGCCTGAGAATGTCGAACAACGACGACTCTGGTTCTTCGTCTGTTTCTTCGGATAGTTCCCTTTCGAGGGAGGGTGTGAAGCTTCTCCCTTCCTCGCCCTCCGATCAGACTTTCAAGTGCTTCTCTTTCTCTGACTTGAAGAAGAAGGTTATGGCAGGCATGTGTAAAACTTGCCACAAAGAAGGGTATTGGAGATACTTGGTTCTGGGGAAAGCATGTTGCCACCTAGGCCTAATGGAAGACGCAATGGTCCTTCTCCAAACCGGCAAACGCCTAGCCACCGCCGCATTCCGCCGCGAGAGCGTGTGCTGGTCCGACGACAGCTTCTCCCTCTCCAACTCCCTCTTCTCCGGCGACACCCCCACCCCCACCACCCCACCCCGCGCCCCACTCCTGGAGTCCGAAGCCGTCACCCAACTCCTCGCCCACATAAAGCTCCTCCTCCGCCGCCGTGCCGCCGCCCTCGCCGCCCTGGACGCCGGCCTCCACTCGGAAGCCATCCGGCACTTCTCAAAAATCGTGGACGGCCGCCGCGGCGCCCCTCAGGGCTTCCTCGCGGAGTGCTACATGCACAGAGCCTCCGCGCACCACTCGGCCGGGCGAATCGCGGACTCAATCGGCGACTGCAACAGAACCCTCGCCCTGGACCCCACCTGCATCCACGCCCTCGAAACCCGAGCCTCCCTCCTCGAATCCATTCGGTGCTTCCCAGACTCCCTCCACGACCTCGAACACCTCAAGCTCCTCTACAACACCATCCTCCGGGACCACAAGCTCGCGGGCCCCACCTGGAAGAAGCGCCACCACAGCGTACGCTACAGAGAAATCCCCGGGAAGCTCTGCGCTCTCACCGTAAAAACCCAGGAACTCAAACAGAGGATCGCTTCCGGGGACACCGGGAACGTGGACTACCACGCGCTCATCGGGTTGCGGCGCGGGTGCGGGCGTTCGGAGCTGCAGAGGGCGCATCTGTTGTTGTGTCTGAAACACAAACCCGACAAGGCCACGTGCTTCATGGAGCGGTGCGAGCTGGCGGACGAGCGCGACCTCGACTCGGTTAAGGAAAGGGCGAAAATGTCGGCGCTGTTGCTCTACAGGTTGCTCCAGAAGGGTTACACCAATGTGATGGGTACCATCATGGAGGAGGAGGCTGCTGCCGAGAAGCAGAGGAAGAAGGTTCTAGAAGCTCAATTGATGAGTAATGAGAAATTGGAAGACAAGAAGTGCACCGTTTCATCGCCTTCGACGGCGAACCCCTCTGTTTATCAGGGGGTGTTTTGCCGCGATATTGCGGTGGTTGGGAACTTGCTTTCGCAATCGGGGTTCAACCGCTCCATTCCGGTGAAGTACGAGGCGATGAGCTGCTGA 1635 0.5878 MAVTTPCLNATEKKHWWLTNRKIVEKYMRDARSLIATQEQSEIASALNLLDAALAIYPRLDEALELRARSLLYLRRFKDVADMLQDYIPSLRMSNNDDSGSSSVSSDSSLSREGVKLLPSSPSDQTFKCFSFSDLKKKVMAGMCKTCHKEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLATAAFRRESVCWSDDSFSLSNSLFSGDTPTPTTPPRAPLLESEAVTQLLAHIKLLLRRRAAALAALDAGLHSEAIRHFSKIVDGRRGAPQGFLAECYMHRASAHHSAGRIADSIGDCNRTLALDPTCIHALETRASLLESIRCFPDSLHDLEHLKLLYNTILRDHKLAGPTWKKRHHSVRYREIPGKLCALTVKTQELKQRIASGDTGNVDYHALIGLRRGCGRSELQRAHLLLCLKHKPDKATCFMERCELADERDLDSVKERAKMSALLLYRLLQKGYTNVMGTIMEEEAAAEKQRKKVLEAQLMSNEKLEDKKCTVSSPSTANPSVYQGVFCRDIAVVGNLLSQSGFNRSIPVKYEAMSC 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00129 544 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 544 - -
Gma02g00129 544 CDD DnaJ 392 429 IPR001623 -
Gma02g00129 544 Gene3D Tetratricopeptide repeat domain 35 497 IPR011990 GO:0005515
Gma02g00129 544 Coils Coil 542 544 - -
Gma02g00129 544 PANTHER - 1 544 - -
Gma02g00129 544 MobiDBLite consensus disorder prediction 95 117 - -
Gma02g00129 544 SUPERFAMILY TPR-like 242 337 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00129 Gma-Chr2 1250991 1253911 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00129 - - gmx:106797171 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00129 02 1250991 1253911 Gma02g00129 02 1250991 1253911 ECH
Gma10g00133 10 1279942 1283100 Gma02g00129 02 1250991 1253911 GST
Gma19g02047 19 49387280 49390522 Gma02g00129 02 1250991 1253911 PCT
Gma03g02012 03 45725423 45728722 Gma02g00129 02 1250991 1253911 PCT
Gma02g00129 02 1250991 1253911 Gma19g02047 19 49387280 49390522 PCT
Gma02g00129 02 1250991 1253911 Gma03g02012 03 45725423 45728722 PCT