Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02012 ATGGCGGTTACTACTCGCACTCTATCTGCCACAGAAAAGAAACACTGGTGGCTTACCAACCGAAAGATTGTCGAGAAATACATTAAGGATGCAAGGAGCTTAATAGCGACGCAAGATCAGAGCGAGATAGCTTCGGCTCTGAACCTTGTAGATGCGGCACTGGCGATTTCTCCGAGGTTTGACCAAGCGCTTGAGCTGAGAGCGAGGGCGTTGCTGTATTTGCGGCGGTTCAAGGAGGTTGCGGATATGCTTCAGGACTACATTCCGAGCCTGAGAATGGGAAACGATGACTCATCATCGTCTTCTTCTTCTTCTTCTTCTTCTGACACCTCTTCTCAGCAGCTTTCGAGGGAGGGAGTGAAGCTTCTCTCTTCTTCCTCGGAGTCTCCGGTGAGGGATCATAGTTTCAAGTGCTTCTCTGTGTCTGACCTCAAGAAGAAGGTGATGGCAGGGCTGTGTAAAACTTGCGACAAGGAAGGGCAATGGAGATACTTGGTGTTGGGTGAAGCATGCTGCCACCTAGGCCTAATGGAGGATGCAATGGTTCTTCTTCAAACAGGGAAACGCATTGCAAGCGCGGCATTCCGGCGCGAGAGTGTGTGCTGGTCTGAAGACAGCTTTTATGTTACCAATATACCCTTCTCCGGAGATTCCACAAACGCGCCACCCTCAACTCCGCCGCGAACCCTTCTCGCGGACTCCGAGAGCGTGGCCCAACTCCTCGGCCACATTAAGTTCCTCCTCCGCCGCCGCGCCGCCGCACTCGCCGCCCTCGACGCCGGGCTCTACTCCGAGGCCATCCGCCACTTCTCGAAAATCGTCGACGGCCGGCGCAGCGCGCCGCAGAGCTTCCTCGCCGAATGCTACATGCACCGCGCCTCCGCGCACCGTTCCGCAGGGCGAATCGCCGAGTCAATTGCCGATTGCAACCGCACCCTCGCATTGGACCCCACTTGCATCCAAGCACTCGAAACAAGAGCTTCACTCTTCGAAACAATTCGCTGTTTACCAGATTCTCTTCACGATCTCGAACACTTAAAGCTTCTCTACAATTCAATCTTGCGTGATCGCAAGCTTCCTGGTCCTGCGTGGAAGCGCCACAACGTGCGCTACAGAGAAATTCCAGGGAAACTTTGCTCCCTCACTATTAAAATTCAGGAACTTAAACAGAGGTTGGCTTCTGGTGAAACTGGAAATGTTGATTACTATGCTTTGATTGGTGTCCGACGAGGTTGTTCCCGGTCGGAGTTGGAGAGGGCACACTTGTTGCTTTCCTTGAGGCATAAGCCTGATAAGGCAACTGGGTTCATCGAAAGGTGCGAGCTTGCAGATGAGCGTGATGTTGAGTCTGTTAAAGAAAGGGTGAAAATGTCTTCGTTGTTGTTATATAGATTGGTTCAGAAGGGTTACACTAATGTGATGGGTAATATTATGGATGAGGAAGCTGCTGAGAAGCAGAGAAAGAAGGCTGCTTTGCAAGCTCTTGAAGCACAGAAAGAGAAAGCCAATGAAGCTGCTGCTGAGTTGAATAAGGTCGTTGAGAGTAATAGTACTCAAATGTCTCAAAATAGGTCTATGGTGTCTTCTTCTACGGTGAATCCGGCGGTGTTTCAGGGTGTTTTCTGCCGTGATCTTACGGTGGTGGGGAACTTGCTTTCTCAGGCGGGGTTTAACCGATCCATGCCGGTGAAGTATGAAGCTTTGAGCTGTTGA 1713 0.5126 MAVTTRTLSATEKKHWWLTNRKIVEKYIKDARSLIATQDQSEIASALNLVDAALAISPRFDQALELRARALLYLRRFKEVADMLQDYIPSLRMGNDDSSSSSSSSSSSDTSSQQLSREGVKLLSSSSESPVRDHSFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSEDSFYVTNIPFSGDSTNAPPSTPPRTLLADSESVAQLLGHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRSAPQSFLAECYMHRASAHRSAGRIAESIADCNRTLALDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCSLTIKIQELKQRLASGETGNVDYYALIGVRRGCSRSELERAHLLLSLRHKPDKATGFIERCELADERDVESVKERVKMSSLLLYRLVQKGYTNVMGNIMDEEAAEKQRKKAALQALEAQKEKANEAAAELNKVVESNSTQMSQNRSMVSSSTVNPAVFQGVFCRDLTVVGNLLSQAGFNRSMPVKYEALSC 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02012 570 PANTHER - 1 570 - -
Gma03g02012 570 MobiDBLite consensus disorder prediction 95 115 - -
Gma03g02012 570 SUPERFAMILY TPR-like 252 347 IPR011990 GO:0005515
Gma03g02012 570 SUPERFAMILY Chaperone J-domain 397 435 IPR036869 -
Gma03g02012 570 Gene3D Tetratricopeptide repeat domain 227 359 IPR011990 GO:0005515
Gma03g02012 570 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 570 - -
Gma03g02012 570 Coils Coil 478 515 - -
Gma03g02012 570 SMART tpr_5 286 319 IPR019734 GO:0005515
Gma03g02012 570 CDD DnaJ 401 435 IPR001623 -
Gma03g02012 570 Gene3D DnaJ domain 387 532 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02012 Gma-Chr3 45725423 45728722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02012 - - gmx:100800231 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02012 03 45725423 45728722 Gma03g02012 03 45725423 45728722 ECH
Gma19g02047 19 49387280 49390522 Gma03g02012 03 45725423 45728722 GST
Gma03g02012 03 45725423 45728722 Gma10g00133 10 1279942 1283100 PCT
Gma03g02012 03 45725423 45728722 Gma02g00129 02 1250991 1253911 PCT
Gma10g00133 10 1279942 1283100 Gma03g02012 03 45725423 45728722 PCT
Gma02g00129 02 1250991 1253911 Gma03g02012 03 45725423 45728722 PCT