Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01953 ATGACAGGGCAAGTGGTGGTGACCAACGGTGGCGGATGCGGTGGTGTCGGGAAGGGACGGAGAGGCGGCGGCGGCGAAGAGGAGCAGAACCCGGCGTCCCCGGTGGCGGTTCTGCTGGCGGCGTTGAGGAAGTCAATGGTGGCGTGCAGTGTGGACAGTCCCGACGATGTAATCTCCGCCGTCCATCATCCCATGGAGATCGGATGGCCCacaaacgttaagcatgttagccatgtcaccttcgatcgcttcaatagttttctgggtcttcctcttgagttacaggttcatgtccccgctcccgttcccagtgctagtgttagtgtgtttggcgtctcagcagaatcaatgcagtgttcctatgattcaaaaggaaacagtgtccccactattctactgctaatgcaagagcgattatactcacaaggtggcctaaaggctgaaggtatatttcgcattaatccagaaaacagtcaagaggagaatttgagggagcagttgaataagggaattgtgccagatgacattgatgtccattgcttagcaggcctaattaaagcatggttcagggaacttccttcaggactgctagacggactttcccatgagcaagttcttgagtgcaacacagaagatgaatctgttcagcttgtgaagcagctaaagccaactgaatcagccttgctcaactgggctattgatctcatggctgatattgtagcagaagaggattataacaaaatggatgcaagaaacattgctgtggtttttgctccaaatatgactcaaatgtctgatccaccaactgctctgatgcatgcagtccaagtgatgaatttactaaagaccctaatactgaagacacttagagaacgtgaagaaacagctgcagCAGGATATTCACCCATGTCATCTCTTTCATCCGATTGCCAATCTGAGGATGACTATGATAGTCAGCAAGAAATGGATACCAGTGGCGAATTGAGAGAGACCAAGTTAGACGATGATGATGATGTTAACTAA 1023 0.1867 MTGQVVVTNGGGCGGVGKGRRGGGGEEEQNPASPVAVLLAALRKSMVACSVDSPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNSFLGLPLELQVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSQEENLREQLNKGIVPDDIDVHCLAGLIKAWFRELPSGLLDGLSHEQVLECNTEDESVQLVKQLKPTESALLNWAIDLMADIVAEEDYNKMDARNIAVVFAPNMTQMSDPPTALMHAVQVMNLLKTLILKTLREREETAAAGYSPMSSLSSDCQSEDDYDSQQEMDTSGELRETKLDDDDDVN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01953 340 MobiDBLite consensus disorder prediction 1 30 - -
Gma19g01953 340 Pfam RhoGAP domain 129 263 IPR000198 GO:0007165
Gma19g01953 340 Gene3D CRIB domain 62 98 IPR036936 -
Gma19g01953 340 PANTHER MKIAA1688 PROTEIN 1 339 IPR044785 GO:0005096
Gma19g01953 340 Pfam P21-Rho-binding domain 66 95 IPR000095 -
Gma19g01953 340 Gene3D Rho GTPase activation protein 99 292 IPR008936 GO:0007165
Gma19g01953 340 MobiDBLite consensus disorder prediction 296 340 - -
Gma19g01953 340 ProSiteProfiles Rho GTPase-activating proteins domain profile. 112 293 IPR000198 GO:0007165
Gma19g01953 340 ProSiteProfiles CRIB domain profile. 67 80 IPR000095 -
Gma19g01953 340 SUPERFAMILY GTPase activation domain, GAP 108 286 IPR008936 GO:0007165
Gma19g01953 340 CDD RhoGAP 129 279 - -
Gma19g01953 340 MobiDBLite consensus disorder prediction 322 340 - -
Gma19g01953 340 CDD CRIB 65 95 - -
Gma19g01953 340 SMART PBD_5 67 101 IPR000095 -
Gma19g01953 340 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 339 - -
Gma19g01953 340 SMART RhoGAP_3 126 289 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01953 Gma-Chr19 48656819 48659122 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01953 - K20642 gmx:100812700 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01953 19 48656819 48659122 Gma19g01953 19 48656819 48659122 ECH
Gma19g01953 19 48656819 48659122 Gma03g01916 03 45033533 45036821 GST
Gma19g01953 19 48656819 48659122 Gma10g00214 10 1975650 1978907 PCT
Gma19g01953 19 48656819 48659122 Gma02g01383 02 15987552 15990694 PCT
Gma10g00214 10 1975650 1978907 Gma19g01953 19 48656819 48659122 PCT
Gma02g01383 02 15987552 15990694 Gma19g01953 19 48656819 48659122 PCT