Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01916 ATGACAGGGCAAGTGGTGGTGACCAACGGTGGCGGATGCGCTGCTGTCGGGAAGGGCCGGAGAGCCGCCGCCGGCGAAGAGGAGCAGAACCCGGCGTCACCGGTGGCGCTTCTGCTGGCGGCGCTGAGGAAGTCAATGGTGGCCTGCAGCGTGGACAGTCCCGACGATGTAATCTCCGCCGTCCATCATCCCATGGAGATCGGATGGCCCacaaacgttaagcatgttagtcatgtcacgttcgatcgcttcaatggctttctgggtcttcctcttgagttagaggttcatgtccccgctcctgttcccagtgctagtgttagtgtgtttggcgtctcagcagaatcaatgcagtgttcctatgattcaaaaggaaacagcgtccccactattctactgctaatgcaagatcgattatactcacaggatggcctaaaggctgaaggcatatttcgcattaatccagaaaacagtcaagaggagcatttgagggagcagttgaataagggcattgtgccagatgacattgatgtccactgtttggcaggcctaattaaagcatggttcagggaacttccttcaggagtgctagatggactttcccctgagcaagttcttgagtgcaacacagaagaagaatctgttgagcttgtgaaacagctaaagccaactgaatcagccttgctcaactgggctattgatctcatgtctgatgttgtagcagaagaagattataacaaaatggatgcaagaaacattgctatggtttttgctccaaatatgactcagatgtctgatccactaactgctctgatgcatgcggtccaagtgatgaatttactaaagaccctaatattgaagacacttagagaacgcgaagaaacagctgcagCAGGATATTCACCTATGTCATCTCTTTCATCTGATCATCAGTCTGAGGATGACTATGATAGTCAGCAAGAAATGGATACCAGTGGTGAATTGAGAGAGACCAAGTCAGATGATGATCATGATCATGATGTTAACTACAGTCATGCCAGTGAAGAAGAAGGGGAAGCTGATGCATCAGTAAGCGATATAGTGGAATGCTTCTTGAAGCGTTTGGATGAGAAAACAAAAAGATTCTCAGAAGAACCTGCAGGGTATTTGCAAGAGAAGTTAGAGAGCCCCAAGAGTTGCTCCGGCTACAACTTGGAATCTGCTTTAACATTTACTGATATCAAAACTGTGGATTCGTGCTCGAGTCCCTCCTATGAAAATGACTCAAGAACAACTTTGACTGCTGAGGAATCAAATGCTGACACAAGTAGTCCATCAATAGAAAGTACAAGCACCAATGATGTGGAGATGATTGATAAGTTTACAGATTCCGTTTCACTAGTTCCACTGTTTGCATCTAGTTAA 1404 0.2472 MTGQVVVTNGGGCAAVGKGRRAAAGEEEQNPASPVALLLAALRKSMVACSVDSPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQDGLKAEGIFRINPENSQEEHLREQLNKGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVELVKQLKPTESALLNWAIDLMSDVVAEEDYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLREREETAAAGYSPMSSLSSDHQSEDDYDSQQEMDTSGELRETKSDDDHDHDVNYSHASEEEGEADASVSDIVECFLKRLDEKTKRFSEEPAGYLQEKLESPKSCSGYNLESALTFTDIKTVDSCSSPSYENDSRTTLTAEESNADTSSPSIESTSTNDVEMIDKFTDSVSLVPLFASS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01916 467 SMART PBD_5 67 101 IPR000095 -
Gma03g01916 467 ProSiteProfiles Rho GTPase-activating proteins domain profile. 112 293 IPR000198 GO:0007165
Gma03g01916 467 Pfam P21-Rho-binding domain 66 94 IPR000095 -
Gma03g01916 467 Pfam RhoGAP domain 129 263 IPR000198 GO:0007165
Gma03g01916 467 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 467 - -
Gma03g01916 467 ProSiteProfiles CRIB domain profile. 67 80 IPR000095 -
Gma03g01916 467 Gene3D Rho GTPase activation protein 99 291 IPR008936 GO:0007165
Gma03g01916 467 MobiDBLite consensus disorder prediction 413 447 - -
Gma03g01916 467 SUPERFAMILY GTPase activation domain, GAP 108 286 IPR008936 GO:0007165
Gma03g01916 467 CDD RhoGAP 129 279 - -
Gma03g01916 467 PANTHER MKIAA1688 PROTEIN 1 467 IPR044785 GO:0005096
Gma03g01916 467 SMART RhoGAP_3 126 289 IPR000198 GO:0007165
Gma03g01916 467 MobiDBLite consensus disorder prediction 296 356 - -
Gma03g01916 467 CDD CRIB 65 95 - -
Gma03g01916 467 MobiDBLite consensus disorder prediction 310 352 - -
Gma03g01916 467 Gene3D CRIB domain 62 98 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01916 Gma-Chr3 45033533 45036821 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01916 - K20642 gmx:100812700 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01916 03 45033533 45036821 Gma03g01916 03 45033533 45036821 ECH
Gma19g01953 19 48656819 48659122 Gma03g01916 03 45033533 45036821 GST
Gma03g01916 03 45033533 45036821 Gma10g00214 10 1975650 1978907 PCT
Gma03g01916 03 45033533 45036821 Gma02g01383 02 15987552 15990694 PCT
Gma10g00214 10 1975650 1978907 Gma03g01916 03 45033533 45036821 PCT
Gma02g01383 02 15987552 15990694 Gma03g01916 03 45033533 45036821 PCT