LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g01383	ATGACCGGAGTGGTCATGGTTACCAAGGGAGGTGGATGCGGCGGCGGCAAGCGGGCGAGGGCGGCGCGAACCGCCGAGGAGGAAGAAGAGCAGCAGAACCAGCTGTCGCTGGTGGCGCTTCTGTTGGCGGCCATCAGAAAATCGATGGTGTCGTGCAGGGTGGACCCACCCGACGATGTAATCTCCACCGTCCATCACATGGAGATCGGATGGCCAaccaacgtccagcacatcactcatgtcaccttcgaccgcttcaacggcttcctcggtctcccctatgagttccaagttgagatccctgctagggttcccagtgctagtgtaagcgtgtttggggtctcagcagaatctatgcagtgttcttatgatccaaaaggaaacagtgtccccactattctcttgctaatgcaggaccgtctatactcacagggaggcttaaaggctgaaggtatatttcgtattaaccctgaaaatagtcaagaggagcatgtgagggaccagttgaataggggcattgtgccggatgacattgatgtccactgtttggctggactgattaaagcctggttccgagagctaccttccggagtgctagatggactttccccagtgcaagttcttcagtgcaacacagaagaagaatctgttgagcttgtgaaacaactaaagccaactgagtctgccttactcagctgggctattgatctcatggctgatgttgtagaagaggaggaacttaacaaaatgaatgcaagaaatattgcaatggtttttgcaccaaacatgactcagatgtctgatcctctaactgccctgatgcatgcggttcaagtgatgaacttactcaagacacttatcatgaagacacttagagaacgcgaagaaacagcaacaggtggctattCTCCGATGTCATATCATTCATCAGATCGTCAGTCTGAGGATGAATACGACAGTCAGCGAGAAATGGACACAAGCGGTGAATTGAGAGGGACCAAATCAGACTATGATGATCGTGCTCACAATGGTCACAGCAGTGAAGGGGAGGCTGAATCTTTAAGCGAGATAGAGGATTGCTTCTTGAAGCAGTTGGATGAAAACACAGAAGGATTCTCAGAAGAACCTGCATATCATTTGGACAAGTATGTTAGCACCAGAAGTTGCTCTGGCTATAGCATAGAACCTTTTATATCTACTACTGATGGAAAAGCAGGAAATTCCTGCTTGAAGACAACACTGACCAGTCTGACCTCAAATGCTGACTCAAGTAACTCATCAATAGAATGTACCGGCACCAAAGATGTGGAGATGATGGATAAATTTGCAGATTCCATTTCAACCGTGCCACCACTCCTTGCTTCTAGTTAA	1371	0.2443	MTGVVMVTKGGGCGGGKRARAARTAEEEEEQQNQLSLVALLLAAIRKSMVSCRVDPPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDPKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPVQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEEEELNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETATGGYSPMSYHSSDRQSEDEYDSQREMDTSGELRGTKSDYDDRAHNGHSSEGEAESLSEIEDCFLKQLDENTEGFSEEPAYHLDKYVSTRSCSGYSIEPFISTTDGKAGNSCLKTTLTSLTSNADSSNSSIECTGTKDVEMMDKFADSISTVPPLLASS	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma02g01383	456	ProSiteProfiles	CRIB domain profile.	69	82	IPR000095	-
	Gma02g01383	456	MobiDBLite	consensus disorder prediction	297	355	-	-
	Gma02g01383	456	Gene3D	Rho GTPase activation protein	100	295	IPR008936	GO:0007165
	Gma02g01383	456	Gene3D	CRIB domain	64	99	IPR036936	-
	Gma02g01383	456	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	114	295	IPR000198	GO:0007165
	Gma02g01383	456	Pfam	P21-Rho-binding domain	68	99	IPR000095	-
	Gma02g01383	456	SMART	PBD_5	69	103	IPR000095	-
	Gma02g01383	456	Pfam	RhoGAP domain	131	265	IPR000198	GO:0007165
	Gma02g01383	456	CDD	RhoGAP	131	287	-	-
	Gma02g01383	456	PANTHER	RHO GTPASE ACTIVATION PROTEIN-RELATED	1	415	-	-
	Gma02g01383	456	MobiDBLite	consensus disorder prediction	310	355	-	-
	Gma02g01383	456	SUPERFAMILY	GTPase activation domain, GAP	110	288	IPR008936	GO:0007165
	Gma02g01383	456	SMART	RhoGAP_3	128	291	IPR000198	GO:0007165
	Gma02g01383	456	PANTHER	MKIAA1688 PROTEIN	1	415	IPR044785	GO:0005096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g01383	Gma-Chr2	15987552	15990694	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma02g01383	-		-	gmx:100807134	830.861

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma02g01383	02	15987552	15990694	Gma02g01383	02	15987552	15990694	ECH
	Gma10g00214	10	1975650	1978907	Gma02g01383	02	15987552	15990694	GST
	Gma19g01953	19	48656819	48659122	Gma02g01383	02	15987552	15990694	PCT
	Gma03g01916	03	45033533	45036821	Gma02g01383	02	15987552	15990694	PCT
	Gma02g01383	02	15987552	15990694	Gma19g01953	19	48656819	48659122	PCT
	Gma02g01383	02	15987552	15990694	Gma03g01916	03	45033533	45036821	PCT