Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00214 ATGACCGGAGTGGTCATGGTGACCAAGGGCGGTGGATGCGGCGGCGGCGGGAAGCGGACGAGGTCGGCGCGAACCGCCGAGGAGGAAGAAGAGCAGCAGAACCAGCTGTCGCTGGTGGCGCTTCTCTTGGCGGCCATCAGAAAATCGATGGTGTCGTGCAGGGTGGACCCACCCGAGGACGTAATCTCCACCGTCCATCACATGGAGATCGGATGGCCAaccaacgtccagcacatcactcatgtcaccttcgaccgcttcaacggcttcctcggtcttccctatgagttccaagtcgagatccctgccagggtccccagtgctagtgtaagtgtgtttggtgtctcagcagaatctatgcagtgttcttatgatccaaaaggaaacagtgtccccactattcttttgctaatgcaggaccgtctatactcgcagggaggcttgaaggctgagggtatatttcgtataaaccccgaaaatagtcaagaggagcatgtgagggaccagttgaataggggcattgtgccggatgatattgatgtccactgtttagcggggctgatcaaagcctggttccgagagctaccttcgggagtgctagatggactttcccctgagcaagttcttcagtgcaacacagaagaagaatctgttgagcttgtgaagcagctaaagccaaccgagtctgctttactcagctgggctattgatctcatggctgatgttgtagaagaggaggaatttaacaaaatgaatgctagaaatattgcaatggtttttgctccaaacatgactcagatgtctgatcctctaacagccctgatgcatgcggttcaagtgatgaacttactcaagacactcatcatgaagacacttagagaacacgaacaaacagcaaaaggtggctattCTCCCATGTCATATCATTCATCAGATCGCCAGTCTGAGGATGAATACAGCAGTCAGCGAGAAATGGACACAAGCGGTGAATTGAGAGGAACCAAATCAGATTATGATGATCATGCCCACTATGGTCACAGTAGTGAAGGGGAAGCTGGATCTTTGAGTGAGATAGAGGAGGAGTGCTTCTTGAAGCAGTTGGATGAGAACAAAAAAGGATTCTCAGAGGAATCTGCAGTTTATTTGGATAAGTATGTTAGCACCAGGAGTTTCTCTGGCTATAACATGGAACCTTCTATATCTGTTACTGATGGCAAAGCAGGGAATTCCTGCTTGAGTACAACACTGACTGATTTGGCCTCAAATGTTGACTCAAGTAGTTCATCAATAGGATGTACCGGCACCAAAGATGTGGAGATGATGGATAAGTTTGCAGATTCTATTTCACCTGTGCCACCACTCCTTGCTTCTAGTTAA 1377 0.2469 MTGVVMVTKGGGCGGGGKRTRSARTAEEEEEQQNQLSLVALLLAAIRKSMVSCRVDPPEDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDPKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREHEQTAKGGYSPMSYHSSDRQSEDEYSSQREMDTSGELRGTKSDYDDHAHYGHSSEGEAGSLSEIEEECFLKQLDENKKGFSEESAVYLDKYVSTRSFSGYNMEPSISVTDGKAGNSCLSTTLTDLASNVDSSSSSIGCTGTKDVEMMDKFADSISPVPPLLASS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00214 458 MobiDBLite consensus disorder prediction 9 28 - -
Gma10g00214 458 MobiDBLite consensus disorder prediction 311 347 - -
Gma10g00214 458 CDD RhoGAP 132 288 - -
Gma10g00214 458 Gene3D Rho GTPase activation protein 101 299 IPR008936 GO:0007165
Gma10g00214 458 SUPERFAMILY GTPase activation domain, GAP 111 289 IPR008936 GO:0007165
Gma10g00214 458 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 421 - -
Gma10g00214 458 SMART RhoGAP_3 129 292 IPR000198 GO:0007165
Gma10g00214 458 MobiDBLite consensus disorder prediction 298 355 - -
Gma10g00214 458 Pfam RhoGAP domain 132 266 IPR000198 GO:0007165
Gma10g00214 458 Gene3D CRIB domain 65 100 IPR036936 -
Gma10g00214 458 SMART PBD_5 70 104 IPR000095 -
Gma10g00214 458 PANTHER MKIAA1688 PROTEIN 1 421 IPR044785 GO:0005096
Gma10g00214 458 ProSiteProfiles CRIB domain profile. 70 83 IPR000095 -
Gma10g00214 458 ProSiteProfiles Rho GTPase-activating proteins domain profile. 115 300 IPR000198 GO:0007165
Gma10g00214 458 Pfam P21-Rho-binding domain 69 100 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00214 Gma-Chr10 1975650 1978907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00214 - - gmx:100801481 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00214 10 1975650 1978907 Gma10g00214 10 1975650 1978907 ECH
Gma10g00214 10 1975650 1978907 Gma02g01383 02 15987552 15990694 GST
Gma19g01953 19 48656819 48659122 Gma10g00214 10 1975650 1978907 PCT
Gma03g01916 03 45033533 45036821 Gma10g00214 10 1975650 1978907 PCT
Gma10g00214 10 1975650 1978907 Gma19g01953 19 48656819 48659122 PCT
Gma10g00214 10 1975650 1978907 Gma03g01916 03 45033533 45036821 PCT