Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01801 ATGGATCGCTTTTCTTCCAGTACCATTCTCCCCGAAGCGTTTCAAGGTGCCAAAGATGACTTCACCATGCAGCTTGCATTGGTGTGGAACCAAATCAAAGCGCCACTGATTGTCCCGTTGCTGAGACTAGCAGTGTTTCTGTGCTTGATCATGTCGGTGATGATGTTCATTGAGAGAGTCTACATGGGCATTGTCATCACTCTGGTGAAGTTGTTTGGGAGAAAGCCAGAGAAACGTTACAAGTGGGAGCCAATGAAGGACGACATTGAGTTGGGAAACTCTTGTTACCCAATGGTTCTTGTTCAAGTCCCCATGTACAACGAAAGAGAGGTTTATCAGTTGTCTATTGGAGCAGCATGTGGGCTTTCTTGGCCTTCAGATAGGATCATCATACAAGTCCTTGATGACTCCACTGACCCAACGATCAAGGAGTTGGTGCAGCTTGAATGCCAAAGATGGGCAAGCAAAGGGGTGAACATAAAGTATGAGGTTAGGGACAATAGGAATGGGTACAAAGCAGGGGCTCTCAAAGAAGGCATGAAGCGTAGCTACGTGAAACAATGTGATTGTGTTGCTATCTTTGACGCTGATTTTCAACCAGAGCCTGATTTCCTGTGGCGGACCGTTCCATTTCTCGTGCACAATCCCGAATTAGCCCTCATTCAAGCACGGTGGAAATTTGTGAATGCCGATGAATGTTTGATGACCCGAATGCAAGAGATGTCACTAGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGTTTCAACGGGACAGCGGGAGTATGGAGAATTTCGGCGCTTAATGAGGCTGGTGGATGGAAGGATAGGACCACAGTGGAAGATATGGACTTGGCCGTGCGAGCCAGTCTCAAAGGATGGAAATTCTTATACTTGTCTGACTTGAAGGTTAAAAATGAGTTGCCAAGTACTTTCAAGGCCTACCGCTACCAACAGCACCGTTGGTCTTGTGGTCCAGCCAATCTTTTTAGGAAAATGGTCATGGAGATCATAAATAACAAGAAAGTGTCATTGTGGAAGAAGATACATGTGATTTACAGCTTCTTCTTTGTTCGGAAGGTCGTAGCACACATAAACACGTTTGTGTTTTATTGCATTGTATTACCTGCAACAGTTTTGGTGCCTGAGGTTGTGGTCCCAAAGTGGGGAGCTGTCTATATCCCTTCCATCATCACTATTCTTAATGCAGTTGGAACTCCAAGGTCACTCCATTTGATGGTCTTCTGGATTCTCTTTGAGAATGTCATGTCTCTGCATCGAACAAAGGCAACGATTATTGGTTTACTTGAGGCAAGTCGAGTGAACGAATGGGTTGTCACTGAAAAACTTGGTGATGCTCTCAAGACTAAAGCAGGAGGTAAAGCACCTAAAAAGCCTCGATTCAGGATTGGAGACAGGATTCACTTGTTGGAACTTGGTGTCGCATTCTACCTCTTCTTTTGTGGCTGCTATGATATTATGTTTGGGAAAAACCACTTCTTCATCTTCCTCTTTATCCAATCTTTGGCCTTCCTCATCATGGCATTTGGATATGTTGGCACCATTGTTCCCAACTCCTAA 1602 0.4476 MDRFSSSTILPEAFQGAKDDFTMQLALVWNQIKAPLIVPLLRLAVFLCLIMSVMMFIERVYMGIVITLVKLFGRKPEKRYKWEPMKDDIELGNSCYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDCVAIFDADFQPEPDFLWRTVPFLVHNPELALIQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIINNKKVSLWKKIHVIYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVVVPKWGAVYIPSIITILNAVGTPRSLHLMVFWILFENVMSLHRTKATIIGLLEASRVNEWVVTEKLGDALKTKAGGKAPKKPRFRIGDRIHLLELGVAFYLFFCGCYDIMFGKNHFFIFLFIQSLAFLIMAFGYVGTIVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01801 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 313 IPR029044 -
Gma19g01801 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 532 - -
Gma19g01801 533 PANTHER - 1 532 - -
Gma19g01801 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 373 IPR029044 -
Gma19g01801 533 Pfam Glycosyltransferase like family 2 98 332 - -
Gma19g01801 533 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01801 Gma-Chr19 47232216 47237693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01801 1 532 Miscellaneous Gene Families AT5G03760 80.300 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01801 K13680 - gmx:100782772 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01801 19 47232216 47237693 Gma03g01750 03 43582326 43586875 ECH
Gma19g01801 19 47232216 47237693 Gma19g01801 19 47232216 47237693 ECH
Gma19g01801 19 47232216 47237693 Gma03g01750 03 43582326 43586875 GST
Gma19g01801 19 47232216 47237693 Gma10g00603 10 6372156 6379206 PCT
Gma19g01801 19 47232216 47237693 Gma13g01295 13 27370402 27377419 PCT
Gma10g00603 10 6372156 6379206 Gma19g01801 19 47232216 47237693 PCT
Gma13g01295 13 27370402 27377419 Gma19g01801 19 47232216 47237693 PCT