Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01750 ATGGATCGTTTTTCTTCTAGTACCATTCTCCCCGAAGCGTTTCAAGGTGCCAAAGATGACTTCACCATGCAGCTTGCATTGGTCTGGAACCAAATCAAAGCGCCACTCATTGTCCCGTTGCTGAGAATAACAGTGTTTCTGTGCTTGATCATGTCGGTGATGATGTTCATCGAGAGGGTCTACATGGGCATTGTCATCACTCTGGTGAAGTTGTTTGGGAGAAAGCCAGAGAAACGTTACAAGTGGGAACCGATGAAGGACGACATAGAGTTGGGAAACTCTTCTTACCCAATGGTTCTTGTTCAAGTCCCCATGTACAACGAAAGAGAGGTTTATCAGTTGTCTATTGGAGCAGCATGTGGGCTTTCTTGGCCTTCAGATAGGATCATCATACAAGTCCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTGCAGCTTGAATGCCAAAGATGGGCAAGCAAAGGGGTGAACATAAAGTATGAGGTTAGGGACAATAGGAATGGGTACAAAGCAGGGGCTCTCAAAGAAGGCATGAAGCGTAGCTACGTGAAACAATGTGATTGTGTTGCTATCTTTGACGCTGATTTTCAACCAGAGCCTGATTTCCTGTGGCGGACCGTTCCATTCCTCGTGCACAATCCCGAATTAGCCCTCATTCAAGCACGGTGGAAATTTGTGAATGCCGATGAATGTTTGATGACCAGAATGCAAGAGATGTCACTAGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGTTTCAACGGGACTGCGGGAGTATGGAGAATTTCGGCGCTGAATGAGGCTGGTGGATGGAAGGATAGAACCACAGTGGAAGATATGGACTTGGCTGTGCGAGCCAGTCTCAAAGGATGGAAATTCTTATACTTGTCAGACTTGAAGGTTAAAAATGAGTTGCCAAGTACTTTCAAGGCCTACCGCTACCAACAGCACCGTTGGTCTTGTGGCCCAGCCAATCTTTTTAGGAAAATGGCCATGGAGATCATAAACAACAAGAAAGTGTCATTGTGGAAGAAGATACATGTGATTTACAGCTTCTTCTTTGTTCGGAAGGTCGTAGCACACATCAACACGTTTGTGTTTTATTGCATTGTATTACCTGCAACAGTTTTGGTGCCTGAGGTTGTGGTCCCAAAGTGGGGAGCTGTCTATATCCCTTCCATCATCACTATTCTAAATGCAGTTGGAACTCCAAGGTCACTCCATTTGATGGTCTTCTGGATTCTCTTTGAGAATGTCATGTCTCTGCATCGAACAAAGGCAACAATTATTGGTCTACTTGAGGCCAGTCGAGTGAACGAATGGGTTGTCACTGAAAAACTTGGTGATGCTCTCAAGGCTAAAGCAGGAGGTAAAGCACCTAAAAAGCCTCGATTCAGGATTGGAGACAGGATTCACTTGTTGGAACTTGGTGTCGCATTCTACCTCTTCTTTTGTGGCTGCTATGATGTTATGTTCGGGAAAAACCATTTCTTCATCTTCCTCTTTATCCAATCTTTTGCCTTCCTCATCATGGCATTTGGATATGTTGGCACCATTGTTCCCAACTCCTAG 1602 0.4494 MDRFSSSTILPEAFQGAKDDFTMQLALVWNQIKAPLIVPLLRITVFLCLIMSVMMFIERVYMGIVITLVKLFGRKPEKRYKWEPMKDDIELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDCVAIFDADFQPEPDFLWRTVPFLVHNPELALIQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIINNKKVSLWKKIHVIYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVVVPKWGAVYIPSIITILNAVGTPRSLHLMVFWILFENVMSLHRTKATIIGLLEASRVNEWVVTEKLGDALKAKAGGKAPKKPRFRIGDRIHLLELGVAFYLFFCGCYDVMFGKNHFFIFLFIQSFAFLIMAFGYVGTIVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01750 533 Pfam Glycosyltransferase like family 2 98 332 - -
Gma03g01750 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 373 IPR029044 -
Gma03g01750 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 532 - -
Gma03g01750 533 PANTHER - 1 532 - -
Gma03g01750 533 CDD CESA_CaSu_A2 97 333 - -
Gma03g01750 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 314 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01750 Gma-Chr3 43582326 43586875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01750 1 532 Miscellaneous Gene Families AT5G03760 80.488 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01750 K13680 - gmx:100810016 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01750 03 43582326 43586875 Gma03g01750 03 43582326 43586875 ECH
Gma19g01801 19 47232216 47237693 Gma03g01750 03 43582326 43586875 ECH
Gma10g00603 10 6372156 6379206 Gma03g01750 03 43582326 43586875 ECH
Gma13g01295 13 27370402 27377419 Gma03g01750 03 43582326 43586875 ECH
Gma19g01801 19 47232216 47237693 Gma03g01750 03 43582326 43586875 GST
Gma03g01750 03 43582326 43586875 Gma10g00603 10 6372156 6379206 PCT
Gma03g01750 03 43582326 43586875 Gma13g01295 13 27370402 27377419 PCT
Gma10g00603 10 6372156 6379206 Gma03g01750 03 43582326 43586875 PCT
Gma13g01295 13 27370402 27377419 Gma03g01750 03 43582326 43586875 PCT