Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00603 ATGCTCACCACCGGGCTGAGTTTATATCCAGAGAGGAGCAAGATGGAATCATTTCAAGGTTCAAGGGATGACATTTCCTACCAAATGGGTTTGATTTGGAGCCAAGTGAAGGAGCCAGTGATCGTGCCAATGCTGAGGGTGTCAGTGTTTCTGTGCTTGGCCATGTCGTTGATGATGCTGGTCGAGAGGGTGTACATGGGCATTGTCATTTGCTTGGTGAAGCTGTTTGGTCGAAGACCCGAGAAGCGTTACAAGTGGGAGCCTATGAAGGACGATGTTGAGTTGGGAAACTCTAGTTATCCCATGGTCTTGGTCCAAGTCCCAATGTACAACGAAAGAGAGGTTTATCAACTATCAATTGGTGCAGCTTGTGGTCTTTCTTGGCCTTCAGACAGAATCATCATACAAGTTCTTGATGATTCTACTAACCCAACAATCAAGGAGCTGGTGCAAATGGAATGTAGTAGATGGGCGAGCAAAGGGGTGAACATAAAGTACGAGGTGAGGGACAACAGAGACGGGTACAAAGCAGGGGCTCTGAAAGAAGGCATGAAACGGAACTACGTGAAGCAATGTGACTATGTTGCCATCTTTGACGCGGATTTTCAACCGGACCCTGATTTCCTCTGGCGAACTGTCCCATTCCTTGTCAACAACCCTGAACTTGCTCTTGTTCAGGCACGTTGGAAGTTTGTGAATGCCAATGAATGTTTGATGACCAGGATGCAAGAGATGTCACTGGATTACCATTTCACTGTGGAACAAGAAGTGGGGTCTTGCACTTATGCCTTCTTTGGCTTCAACGGAACTGCTGGTGTATGGAGAATTTCGGCGCTGTATGAGTCTGGAGGGTGGAATCATAGGACCACAGTGGAAGATATGGACCTGGCTGTGCGAGCCAGTCTCAGAGGATGGAAATTCTTGTACCTGCCCAATTTGAAGGTTAAAAACGAATTACCAAGTACTTTGAATGCCTACCGTTTCCAACAGCACAGGTGGTCTTGTGGACCAGCCAATCTTTTCATGAAAATGTTCATGGAGATTATGAGAAACAGGAAAGTGTCCTTGTATAAGAAGATATATGTTATTTACAGCTTCTTCTTTGTCCGGAAGGTCGTGGCCCACATCAACACTTTTATGTTCTATTGCATTGTGTTACCCGCTACAGTTGTGGTGCCTGAGGTGGTTGTCCCCAAGTGGGGTGCTGTTTACATCCCTTCCATCATCACACTCCTAAATGCTGTTGGAACTCCAAGGTCACTCCACTTGCTGGTCTTCTGGATTCTCTTTGAGAATACCATGTCTCTGCATCGAACAAAGGCAACAATTATTGGTCTGCTAGAGGGTAGTCGAGCGAATGAATGGATTGTCACTCAAAAGGGTAAACCACCCAAAAGTCGGTTCAGGATAAGGATTCATCATATGTTGGAACTTCTTGTTGGATTCTACCTCTTCTTCTGTGGCTGCTATGATATTATGTTCGGGAAAAACCGCTACTACATATTCCTATACATTCAATCAATTGCTTTCTTCATCATGGCCTTTGGATATGTTGGCATTTTCGATCCCAACTCCTAG 1578 0.4537 MLTTGLSLYPERSKMESFQGSRDDISYQMGLIWSQVKEPVIVPMLRVSVFLCLAMSLMMLVERVYMGIVICLVKLFGRRPEKRYKWEPMKDDVELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTNPTIKELVQMECSRWASKGVNIKYEVRDNRDGYKAGALKEGMKRNYVKQCDYVAIFDADFQPDPDFLWRTVPFLVNNPELALVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSCTYAFFGFNGTAGVWRISALYESGGWNHRTTVEDMDLAVRASLRGWKFLYLPNLKVKNELPSTLNAYRFQQHRWSCGPANLFMKMFMEIMRNRKVSLYKKIYVIYSFFFVRKVVAHINTFMFYCIVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEGSRANEWIVTQKGKPPKSRFRIRIHHMLELLVGFYLFFCGCYDIMFGKNRYYIFLYIQSIAFFIMAFGYVGIFDPNS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00603 525 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 92 317 IPR029044 -
Gma10g00603 525 SUPERFAMILY Nucleotide-diphospho-sugar transferases 98 381 IPR029044 -
Gma10g00603 525 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 15 524 - -
Gma10g00603 525 PANTHER - 15 524 - -
Gma10g00603 525 CDD CESA_CaSu_A2 101 337 - -
Gma10g00603 525 Pfam Glycosyltransferase like family 2 102 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00603 Gma-Chr10 6372156 6379206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00603 16 524 Miscellaneous Gene Families AT5G03760 75.287 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00603 K13680 - gmx:100814280 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00603 10 6372156 6379206 Gma03g01750 03 43582326 43586875 ECH
Gma10g00603 10 6372156 6379206 Gma10g00603 10 6372156 6379206 ECH
Gma10g00603 10 6372156 6379206 Gma13g01295 13 27370402 27377419 GST
Gma19g01801 19 47232216 47237693 Gma10g00603 10 6372156 6379206 PCT
Gma03g01750 03 43582326 43586875 Gma10g00603 10 6372156 6379206 PCT
Gma10g00603 10 6372156 6379206 Gma19g01801 19 47232216 47237693 PCT
Gma10g00603 10 6372156 6379206 Gma03g01750 03 43582326 43586875 PCT