Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01779 ATGTTCAGATTCTGGGGATCACAAGAGCAACAATCACAGGATGGTTCTTCGCAGTCACAGTCGTGGTATCCGCCGTCGGTGGTGAGTTCACCAACTTCGTCGAGGCCTGTTACACCGACTGCATCTTCTTCTTCATTATCACAGAGGCCTTCGTCTCATGTTCCACCTTCTGAAGCTGCTGCAGTTATTGCCGTTTTGAAGGACAAGAGTGTTGATGAGTTGCGGAAGCTTTTATCTGACAAAGATGCGTATCAACAGTTTTTGCATTCACTTGATCAGGTCAAGATTCAAACTAATCTGAAAGATGAACTTTGCAAGGAGAATTTACAGCTTGCAGAGGAAAATCTTCAAAAGGAACCTCGTATCATGGAACTTAGGAATCAATGTAGAATAATTCGGACAACCGAGTTAGCTGCTGCTAAGGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAAGACATGTTGAAATTGAATTCCGCAGCATCCCTTCTCCAAAGGATTCAAGAGTCTGTGAATAAGACCGACGAGGAATCTGAAAACTTGCACCACAATCTCCTTGACAGAGAGATTGACCTTGGTGCTTTTTTGCAAAAGTACAAGAAGCTACGTACCACTTACCACAGGAAGACTCTCGTACATCTTGCTGCCAAAACATCAACAGTATGA 666 0.4324 MFRFWGSQEQQSQDGSSQSQSWYPPSVVSSPTSSRPVTPTASSSSLSQRPSSHVPPSEAAAVIAVLKDKSVDELRKLLSDKDAYQQFLHSLDQVKIQTNLKDELCKENLQLAEENLQKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKEDMLKLNSAASLLQRIQESVNKTDEESENLHHNLLDREIDLGAFLQKYKKLRTTYHRKTLVHLAAKTSTV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01779 221 Pfam Modifier of rudimentary (Mod(r)) protein 67 209 IPR009851 -
Gma19g01779 221 Coils Coil 164 184 - -
Gma19g01779 221 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 221 - -
Gma19g01779 221 Coils Coil 130 160 - -
Gma19g01779 221 SUPERFAMILY Endosomal sorting complex assembly domain 162 209 IPR037202 -
Gma19g01779 221 MobiDBLite consensus disorder prediction 1 54 - -
Gma19g01779 221 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 221 - -
Gma19g01779 221 ProSiteProfiles VPS37 C-terminal domain profile. 141 221 IPR009851 -
Gma19g01779 221 MobiDBLite consensus disorder prediction 1 55 - -
Gma19g01779 221 Gene3D Helix hairpin bin 143 214 IPR029012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01779 Gma-Chr19 47066217 47071012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01779 K12185 - gmx:100779019 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01779 19 47066217 47071012 Gma19g01779 19 47066217 47071012 ECH
Gma19g01779 19 47066217 47071012 Gma03g01729 03 43409861 43418170 GST
Gma19g01779 19 47066217 47071012 Gma10g00579 10 6084569 6087343 PCT
Gma19g01779 19 47066217 47071012 Gma13g01272 13 27080197 27083278 PCT
Gma10g00579 10 6084569 6087343 Gma19g01779 19 47066217 47071012 PCT
Gma13g01272 13 27080197 27083278 Gma19g01779 19 47066217 47071012 PCT