Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00579 ATGTCCACTAAATTTCGGGGATCACAAGAACATCAACATGGTTCTTCTTCTTCCAGCAGCAACACTTCACACGTCCCCCCTGCCCAAGCTGCTGGACTTGTTGCTATTTTGAAGGATAAAAGTGTTGATGAGTTGCGGAAGCTTTTATCTAACAAAGATGTGTATCAGCAGTTTTTAAGTTCACATGATGAGGTCAAGATTCAGAATAATGTGAATGATGATCTTTGCAAGGAGAATCTGCAGCTTGCCGATGAAAATCTACGAAAGGAACCTCGTGTTGTGGAACTCAGGAACCAGTATAAAATAATTTGTACAACTGAGTTGGCTGTGGCTCAAGAGAAACTGAATGAGCTTGAGAAGCAGAAAGAGGAAATGTTGAAGTTGAATTCCCCACTATACCTTCTCCAATGGATTCAAGAGGCTATGAATAATACAGAAGAGGAATCTGAAAATCTGCATCAGCAAGTCCTTGACAGAGAGATTGACCTTGGAGCTTTTCTGCAGAAATACAAAAAGCTACGTACTGCTTACCACAGGAAAAGTCTCATACATCTTGCAGCTAGAACATCAAATATATAG 579 0.4041 MSTKFRGSQEHQHGSSSSSSNTSHVPPAQAAGLVAILKDKSVDELRKLLSNKDVYQQFLSSHDEVKIQNNVNDDLCKENLQLADENLRKEPRVVELRNQYKIICTTELAVAQEKLNELEKQKEEMLKLNSPLYLLQWIQEAMNNTEEESENLHQQVLDREIDLGAFLQKYKKLRTAYHRKSLIHLAARTSNI 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00579 192 ProSiteProfiles VPS37 C-terminal domain profile. 112 192 IPR009851 -
Gma10g00579 192 Pfam Modifier of rudimentary (Mod(r)) protein 38 182 IPR009851 -
Gma10g00579 192 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 14 192 - -
Gma10g00579 192 Coils Coil 101 128 - -
Gma10g00579 192 MobiDBLite consensus disorder prediction 1 27 - -
Gma10g00579 192 SUPERFAMILY Endosomal sorting complex assembly domain 133 180 IPR037202 -
Gma10g00579 192 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 14 192 - -
Gma10g00579 192 Gene3D Helix hairpin bin 116 185 IPR029012 -
Gma10g00579 192 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00579 Gma-Chr10 6084569 6087343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00579 K12185 - gmx:100797771 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00579 10 6084569 6087343 Gma10g00579 10 6084569 6087343 ECH
Gma10g00579 10 6084569 6087343 Gma13g01272 13 27080197 27083278 GST
Gma19g01779 19 47066217 47071012 Gma10g00579 10 6084569 6087343 PCT
Gma03g01729 03 43409861 43418170 Gma10g00579 10 6084569 6087343 PCT
Gma10g00579 10 6084569 6087343 Gma19g01779 19 47066217 47071012 PCT
Gma10g00579 10 6084569 6087343 Gma03g01729 03 43409861 43418170 PCT