Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01729 ATGTTCAGATTCTGGGGATCACAAGAGCAACAATCGCAGGATGGTTCTTCGCAGTCACAGTCGTGGTATCCGCCATCGGTGAGGCCTTCGTCTCATGTTCCACCTTCCGAAGCTGCTGCAGTTATTGCCGTTTTGAAGGACAAGAGTGTTGATGAGTTGCGGAAGCTTTTATCTGACAAAGATGCGTATCAACAGTTTTTGCATTCGCTTGATCAGGTCAAGATTCAAAATAATCTGAAAGATGAACTTTGCAAGGAGAATTTACAGCTTGCAGAGGAAAATCTTCAAAAGGAACCTCGCATCATGGAACTTAGGAATCAATGTAGAATAATTCGAACAACTGAGTTAGCTGCTGCTAAGGAGAAATTAAATGAGCTTGAGAAGCAGAAAGAAGACATGTTGAAATTGAATTCCCCAGCATCCCTTCTCCAAAGGATCCAAGAGTCTGCAAATAAGACTGACGAGGAATCTGAAAACTTGCACCAGCATCTCCTTGACAGAGAGATAGACCTTGCTGCTTTTTTGCAAAAGTACAAGAAGCTACGTACTACTTACCACAGGAAAACTCTTGTACATCTTGCTGCTAAAACATCAACAGTATAA 603 0.4196 MFRFWGSQEQQSQDGSSQSQSWYPPSVRPSSHVPPSEAAAVIAVLKDKSVDELRKLLSDKDAYQQFLHSLDQVKIQNNLKDELCKENLQLAEENLQKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKEDMLKLNSPASLLQRIQESANKTDEESENLHQHLLDREIDLAAFLQKYKKLRTTYHRKTLVHLAAKTSTV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01729 200 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 200 - -
Gma03g01729 200 Coils Coil 109 136 - -
Gma03g01729 200 Pfam Modifier of rudimentary (Mod(r)) protein 46 188 IPR009851 -
Gma03g01729 200 MobiDBLite consensus disorder prediction 1 27 - -
Gma03g01729 200 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 200 - -
Gma03g01729 200 Gene3D Helix hairpin bin 125 193 IPR029012 -
Gma03g01729 200 ProSiteProfiles VPS37 C-terminal domain profile. 120 200 IPR009851 -
Gma03g01729 200 SUPERFAMILY Endosomal sorting complex assembly domain 138 188 IPR037202 -
Gma03g01729 200 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01729 Gma-Chr3 43409861 43418170 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01729 K12185 - gmx:100305851 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01729 03 43409861 43418170 Gma03g01729 03 43409861 43418170 ECH
Gma19g01779 19 47066217 47071012 Gma03g01729 03 43409861 43418170 GST
Gma03g01729 03 43409861 43418170 Gma10g00579 10 6084569 6087343 PCT
Gma03g01729 03 43409861 43418170 Gma13g01272 13 27080197 27083278 PCT
Gma10g00579 10 6084569 6087343 Gma03g01729 03 43409861 43418170 PCT
Gma13g01272 13 27080197 27083278 Gma03g01729 03 43409861 43418170 PCT