Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01692 ATGGGTTCACTAGAAAGATCAAAGAAGAAAGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCCCTATGTTTTTTGATGGGGGTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCAAAGTTGCTGTCTCAAATAGGACAGAATTTGCACCACAACCTAGTGAAATGTCAAACCTCACAACAAATGTCAATAGAATTTGGATAGCTCCAATGCCAGATACCATGCCCGTGAAGCCTAGAATCCTTGAAAATGAAAAGAAAAAAACAACAAAGTTGCATGCAAAAAAACAGCCCCAGTTGAAGCCTAGAAGACTCATAATCATTGTAACACCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGGTTGGCAAATACTATAAAGCTGGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGCTAAAACCAATTCCACAGAACTGCCAGAGATATTAAGGAAAACTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAATTTCACGGAATTAGAAGCTGAACTGAATCACCAGAGGAATCTTGCACTTAAGCACATTGAGCACCACAGGCTCAACGGCATTGTACACTTTGCTGGCCTTTCCAATGTTTATGATCTCCAATTCTTCCATCAGCTTAGAGATATTGAGGTCTTTGGAACATGGCCAACCGCATTGTTAGCTGCACACAGGAAGAAAGTGAAAATCGAAGGACCTGTATGTGATTCATCACAAGTCATTGGTTGGCATCTTAGGAATATGAACAATGAAACTGATACAATCACTCCCCCAATTCATATTTCAAGTTTTGCTTTTAATAGCTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAATTAAAGGGAATTCCACCAGAAGATTGCTCCAAAATCTTGCTATGGCGTTTCAATTTTCGTGCCCGAACCATCACAAATCACTAA 1035 0.4077 MGSLERSKKKVLLWKKAMLHFSLCFLMGVFTGLAPTGKSSLFSTKVAVSNRTEFAPQPSEMSNLTTNVNRIWIAPMPDTMPVKPRILENEKKKTTKLHAKKQPQLKPRRLIIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFRARTITNH 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01692 344 Pfam Glycosyltransferase family 43 131 335 IPR005027 GO:0015018|GO:0016020
Gma19g01692 344 CDD GlcAT-I 109 338 IPR005027 GO:0015018|GO:0016020
Gma19g01692 344 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 341 IPR005027 GO:0015018|GO:0016020
Gma19g01692 344 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 110 344 IPR029044 -
Gma19g01692 344 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 341 - -
Gma19g01692 344 SUPERFAMILY Nucleotide-diphospho-sugar transferases 109 342 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01692 Gma-Chr19 46226526 46229108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01692 1 340 Glycosyltransferase AT2G37090 60.920 7.66e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01692 K20869 - gmx:100785607 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01692 19 46226526 46229108 Gma19g01692 19 46226526 46229108 ECH
Gma19g01692 19 46226526 46229108 Gma03g01644 03 42566964 42569656 GST
Gma19g01692 19 46226526 46229108 Gma10g00467 10 4551422 4553653 PCT
Gma19g01692 19 46226526 46229108 Gma13g01177 13 25958606 25960784 PCT
Gma10g00467 10 4551422 4553653 Gma19g01692 19 46226526 46229108 PCT
Gma13g01177 13 25958606 25960784 Gma19g01692 19 46226526 46229108 PCT