Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01177 ATGGGATCAGTGGAAAGATCAAGAAAGAAAGTCATGTCATGGAAGAAAGCCATGGTGCATTTTTCTCTCTGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCTACAGGTAAATCTATATTTCACAGCCATGTTGATTATTCAAATAGGTCAGAGTTTGCACCACAACCTATTGAAGTGTCACAGAAGACAACAAATGTCAATAGAAGTTGGATAGCTCCAACACCAAGGTCTTTAGTCCACAAGCAAAAATTGCATGTAAAAATAGGGCCCCAGTTGAAGCCTAGAAGACTTATAATCATTGTAACTCCAACAAGCACAAAACTTCCCTTCCAAACAGTGATTTTGGCAAGGCTGGCAAACACTATAAAGCTGGTTCCTCAACCCTTGCTGTGGATTGTTGTGGAAGGGCAAACTGATTCCACAGAACTTTCTAAGACACTTAGGAAGACTGGCATCATGTATAGGCATTTGGTTTCAAAGGAAAACTTCACGGACTTGGAAGCTGAACTGAATCACCAGAGAAATCTTGCACTCAAGCACATTGTGCATCACAGGCTAAGTGGGATCGTACACTTTGCTGAACTTTCCAATGTTTATGATCTCGAATTCTTCCAACAACTAAGATATATTGAGGTATTTGGAACATGGCCAACGGCATCGTTAGCAGCAAACAGGAAGAAAGTGATGATAGAAGGACCTGTGTGTGATTCTTCAAAAGTCATAGGGTGGCATTTAAGGAATATGAACAATGAAACTGATATAATTACTCCTCCGATTCATATTTCAAGTTTTGCATTCAATAGCTCCATTCTCTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTCTTCAAGACACCTCTCAGAATTCAATCAAATTCGTGAAGGAAGTAGTTCTTGAGGATCAAGAAAAGTTGAGGGGAATTCCTCCAGAGGATTGCTCCAGAATCTTGCTTTGGCGTTTCAATTTTCATGCTCGCACCACTTCAAATCATAAATTTCCGACTACTGCATCTGGTGTTATCCGAAAATAA 1035 0.4087 MGSVERSRKKVMSWKKAMVHFSLCFVMGFFTGFAPTGKSIFHSHVDYSNRSEFAPQPIEVSQKTTNVNRSWIAPTPRSLVHKQKLHVKIGPQLKPRRLIIIVTPTSTKLPFQTVILARLANTIKLVPQPLLWIVVEGQTDSTELSKTLRKTGIMYRHLVSKENFTDLEAELNHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRYIEVFGTWPTASLAANRKKVMIEGPVCDSSKVIGWHLRNMNNETDIITPPIHISSFAFNSSILWDPERWGRTSSLQDTSQNSIKFVKEVVLEDQEKLRGIPPEDCSRILLWRFNFHARTTSNHKFPTTASGVIRK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01177 344 Pfam Glycosyltransferase family 43 119 323 IPR005027 GO:0015018|GO:0016020
Gma13g01177 344 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 331 - -
Gma13g01177 344 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 331 IPR005027 GO:0015018|GO:0016020
Gma13g01177 344 CDD GlcAT-I 97 324 IPR005027 GO:0015018|GO:0016020
Gma13g01177 344 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 333 IPR029044 -
Gma13g01177 344 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 97 339 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01177 Gma-Chr13 25958606 25960784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01177 1 328 Glycosyltransferase AT2G37090 59.091 1.96e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01177 K20869 - gmx:100782450 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00467 10 4551422 4553653 Gma13g01177 13 25958606 25960784 GST
Gma19g01692 19 46226526 46229108 Gma13g01177 13 25958606 25960784 PCT
Gma03g01644 03 42566964 42569656 Gma13g01177 13 25958606 25960784 PCT
Gma13g01177 13 25958606 25960784 Gma19g01692 19 46226526 46229108 PCT
Gma13g01177 13 25958606 25960784 Gma03g01644 03 42566964 42569656 PCT