Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00467 ATGGGATCACTAGAAAGATCAAGAAAGAAAGTCATGTTATGGAAGAAAGCCATGGTGCACTTTTCTCTATGTTTTGTGATGGGGTTCTTCACTGGCTTTGCTCCAACAGGTAAATCTATATTTCACAGCCATGTTGATTATTCAAATAGGTCAGAATTTGCACCACAACCTATTGAAATGTCACAGAAGACATTAACAAATGTCAATAGAAGTTGGATAGCTCCAACAGCAAGGTCTTTAGTACACAAGCAAAATACAAAATTACATGTAAAAATAGTGCCCCAGTTGAAGCCTAGAAGACTTATAATCATTGTAACTCCAACAAGCACAAAACATCCTTTCCAAACAGTGATTTTGACAAGGTTGGCAAACACTATAAAGCTGGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGGGCAAACAGATTCCACGGAACTTTGGAAGATGCTTAGGAAGACTGGCATCATGTATAGGCATTTGGTTTCCAAGGAAAACTTCACGGACTTGGAAGCTGAATTGAATCACCAGAGAAATCTTGCACTCAAGCATATTGTGCATCACAGGCTAAGTGGGATAGTACACTTTGCTGAGCTTTCCAATGTTTATGATCTTGAATTCTTCCAACAACTAAGACATATTGAGGTATTTGGAACGTGGCCAACAGCATTGTTAGCAGCAAACATGAAGAAAGTGATCATAGAAGGACCTGTGTGTGATTCTTCACAAGTCATAGGATGGCATTTAAGGAATATGAACAATGAAACTGATACAATTACTCCTCCAATTCATATTTCAAGTTTTGCATTCAATAGCTCCATTCTCTGGGACCCGGAGAGATGGGGTCGCACTTCCTCTCTTCAAGACACCTCTCAGaattcaaTCAAATTCGTGAAGGAAGTAGTTCTAGAGGATGAAGCAAAGTTGAAGGGAATTCCCCCAGAGGACTGCTCCAGAATCTTGCTTTGGCGCTTCAATTTTCATGCTCGCACGACTTCAAATCATAAATTTCTGACTACTACATCTGGTGTTATCCGAAAATAA 1044 0.3956 MGSLERSRKKVMLWKKAMVHFSLCFVMGFFTGFAPTGKSIFHSHVDYSNRSEFAPQPIEMSQKTLTNVNRSWIAPTARSLVHKQNTKLHVKIVPQLKPRRLIIIVTPTSTKHPFQTVILTRLANTIKLVPQPLLWIVVEGQTDSTELWKMLRKTGIMYRHLVSKENFTDLEAELNHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRHIEVFGTWPTALLAANMKKVIIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSLQDTSQNSIKFVKEVVLEDEAKLKGIPPEDCSRILLWRFNFHARTTSNHKFLTTTSGVIRK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00467 347 CDD GlcAT-I 100 327 IPR005027 GO:0015018|GO:0016020
Gma10g00467 347 Pfam Glycosyltransferase family 43 122 326 IPR005027 GO:0015018|GO:0016020
Gma10g00467 347 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 334 - -
Gma10g00467 347 SUPERFAMILY Nucleotide-diphospho-sugar transferases 100 340 IPR029044 -
Gma10g00467 347 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 334 IPR005027 GO:0015018|GO:0016020
Gma10g00467 347 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 100 345 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00467 Gma-Chr10 4551422 4553653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00467 1 331 Glycosyltransferase AT2G37090 59.490 5.18e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00467 K20869 - gmx:100803434 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00467 10 4551422 4553653 Gma10g00467 10 4551422 4553653 ECH
Gma10g00467 10 4551422 4553653 Gma13g01177 13 25958606 25960784 GST
Gma19g01692 19 46226526 46229108 Gma10g00467 10 4551422 4553653 PCT
Gma03g01644 03 42566964 42569656 Gma10g00467 10 4551422 4553653 PCT
Gma10g00467 10 4551422 4553653 Gma19g01692 19 46226526 46229108 PCT
Gma10g00467 10 4551422 4553653 Gma03g01644 03 42566964 42569656 PCT