Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01644 ATGGGCTCACTAGAAAGATCAAAGAAGAAAGTCCTTCTATGGAAGAAGGCCATGCTCCATTTTTCTCTATGTTTTGTGATGGGGGTTTTCACAGGCTTGGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCACAGTTAGTGTCTCAAATAGAACAGAATTTGCACCACAACCCAGTGAAATGTTACACCTCACAACAAATGTCAATAGAAGTTGGATAGCTCCAACCCCAGATTCCATGCCCGTGAAGCCTAGAATCCTTGAAAATGAAAAGAAAACAACAACAAAAAAGTTGCATGTAAAAGCACAGCCCCAGTTGAAGCCTAGAAGACTCCTAATCATTGTAACTCCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGGTTGGCAAATACTATAAAGCTGGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGCTAAAACCAATTCCAAAGAACTGCCAGAGATACTAAGGAAAACTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAATTTCACGGAATTAGAAGCTGAACTCAATCACCAGAGGAATCTTGCGCTTAAGCACATTGAGCACCACAGGCTCAATGGCATTGTACACTTTGCTGGCCTTTCCAATGTTTATGATCTCCAATTCTTCCATCAGCTTAGAGATATTGAGGTCTTTGGAACATGGCCAACAGCTTTGTTAGCTGCACACAGGAAGAAAGTGAAAATCGAAGGACCTGTATGTGATTCATCACAAGTCATTGGTTGGCATCTTAGGAATATGAACAATGAAACTGATACTATCACTCCCCCAATTCATATTTCAAGTTTTGCTTTTAATAGCTCCATCCTTTGGGACTCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCGATCAAGTTCGTGAAGCAAGTAGTTCTAGAGGATGAGGATAAATTAAAGGGAATTCCACCAGAGGATTGCTCCAAAATCTTGCTCTGGCGTTTCAATTTTCGTGCCAGAACTCATTAA 1029 0.414 MGSLERSKKKVLLWKKAMLHFSLCFVMGVFTGLAPTGKSSLFSTTVSVSNRTEFAPQPSEMLHLTTNVNRSWIAPTPDSMPVKPRILENEKKTTTKKLHVKAQPQLKPRRLLIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSKELPEILRKTGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDSERWGRTSSVQDTSQNSIKFVKQVVLEDEDKLKGIPPEDCSKILLWRFNFRARTH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01644 342 CDD GlcAT-I 110 339 IPR005027 GO:0015018|GO:0016020
Gma03g01644 342 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 339 IPR029044 -
Gma03g01644 342 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 341 IPR005027 GO:0015018|GO:0016020
Gma03g01644 342 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 341 - -
Gma03g01644 342 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 111 342 IPR029044 -
Gma03g01644 342 Pfam Glycosyltransferase family 43 132 336 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01644 Gma-Chr3 42566964 42569656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01644 1 341 Glycosyltransferase AT2G37090 61.318 2.45e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01644 K20869 - gmx:100777749 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01644 03 42566964 42569656 Gma03g01644 03 42566964 42569656 ECH
Gma19g01692 19 46226526 46229108 Gma03g01644 03 42566964 42569656 GST
Gma03g01644 03 42566964 42569656 Gma10g00467 10 4551422 4553653 PCT
Gma03g01644 03 42566964 42569656 Gma13g01177 13 25958606 25960784 PCT
Gma10g00467 10 4551422 4553653 Gma03g01644 03 42566964 42569656 PCT
Gma13g01177 13 25958606 25960784 Gma03g01644 03 42566964 42569656 PCT