Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01643 ATGAGAACAGAGTCAAAGAAGATATCTAAGTCTTCGTGGCCAAAATTAGCCGTGAGAAAGTGGCTCAATATAAAGAGTAGTGCTGAGCGGTTTCACTCAGACTATGATGCAACAACAGCAGCAATTGCGAAGGAAAGGAGAAGGAGTTGTTCCGACCGAGATCGTTACGTCGTCGTACCGGATGATTTATCAGAGGGGTGGGTGATGGATTCTACAAGCGGAATGAAGAAGAAATCAGCTCCTGGTCCTGGCACTGGGGGTCCAGACCTCAGGATGTTCGTGGGGACGTGGAATGTCGGAGGGAAGTCACCGAACGAAGGCTTCAATTTGAGGAATTGGCTTACGTGTCCTTCCCCAGCTGACATCTATATTATAGGGTTCCAAGAAATTGTACCGCTAAATGCGGGGAACGTGCTGGGGCCGGAGGACAGTGGGCCAGCAGCGAAGTGGCTGGGGCTTATTCGTGAAGCCTTGAACAGCAACGAGGAGTTGGATAATACTGGACAAAACTCTCCCAAGAGTTCACCACGCTATTGCTTAGCAGCAAGCAAGCAAATGGTTGGCATCTTCTTGTCCGTGTGGGTACGAGCTGATCTTTGCAACCATGTCACCAATTTGAAAGTATCTTGCGTTGGCAGAGGCATCATGGGCTATCTTGGAAATAAGGGATCAACATCAATTAGCATGACATTGTACAACACCACATTCTGCTTCGTTTGCACCCACTTGACTTCTGGGGAGAAATTTGGTGACGAGTTGCGAAGGAACTTGGACGTCTCCGAAATCTTGAAGAAAACTAAGTTTTATCACTCGTTTAAGTCTCTTGCTCATCCACTCCCTCCTGAAAGCATACTAGAACACGATAATATTATTTGGCTTGGCGATTTGAATTATCGGCTAGCTTCTGGCTACGATGACACACATGAACTACTAAAGAAGAATAATTGGCAGGCATTACTAGAAAAGGATCAGTTAAGGATAGAGCAGAAAGCTGGTCGAGTATTCAAAGGTTGGAATGAAGGGAACATATACTTTGCTCCCACTTACAAATACTTGACCAATTCTGACCACTATGTTGCCCAATCCTCCAAATCCAAGATAAAACGACGGACTCCTGCTTGGTGCGATCGAATATTGTGGAAAGGGGAAGGCCTCAATCAAATGTGTTATGTACGTGGAGAGTCCAAATTCTCAGACCACAGGCCAGTGTATTCACTATTCTCGGTTCAAGTGGACATGAAAAGCAAGAATATAGCTCCCTCTACTGCCACTATGCCTAGGTGTTGTCCCTTAAAACCGTTGACAAATTCTTCGTTGTCATCGACTTGTTGCACTGCTAAAGTCCAAGCAGAAGAGCAACTCTTGCTGCTAACAAGAGCACAAAGTTGCATAGACACCGTTCCAAGGTTTTGA 1413 0.4572 MRTESKKISKSSWPKLAVRKWLNIKSSAERFHSDYDATTAAIAKERRRSCSDRDRYVVVPDDLSEGWVMDSTSGMKKKSAPGPGTGGPDLRMFVGTWNVGGKSPNEGFNLRNWLTCPSPADIYIIGFQEIVPLNAGNVLGPEDSGPAAKWLGLIREALNSNEELDNTGQNSPKSSPRYCLAASKQMVGIFLSVWVRADLCNHVTNLKVSCVGRGIMGYLGNKGSTSISMTLYNTTFCFVCTHLTSGEKFGDELRRNLDVSEILKKTKFYHSFKSLAHPLPPESILEHDNIIWLGDLNYRLASGYDDTHELLKKNNWQALLEKDQLRIEQKAGRVFKGWNEGNIYFAPTYKYLTNSDHYVAQSSKSKIKRRTPAWCDRILWKGEGLNQMCYVRGESKFSDHRPVYSLFSVQVDMKSKNIAPSTATMPRCCPLKPLTNSSLSSTCCTAKVQAEEQLLLLTRAQSCIDTVPRF 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01643 470 Gene3D Endonuclease/exonuclease/phosphatase 84 426 IPR036691 -
Gma19g01643 470 Pfam Endonuclease/Exonuclease/phosphatase family 95 400 IPR005135 GO:0003824
Gma19g01643 470 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 9 171 IPR045849 GO:0004445|GO:0046855
Gma19g01643 470 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 173 459 IPR045849 GO:0004445|GO:0046855
Gma19g01643 470 SMART i5p_5 88 415 IPR000300 GO:0016791|GO:0046856
Gma19g01643 470 SUPERFAMILY DNase I-like 88 414 IPR036691 -
Gma19g01643 470 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 173 459 - -
Gma19g01643 470 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 9 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01643 Gma-Chr19 45816498 45826805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01643 89 411 Acyl Lipid Metabolism Gene Families AT1G65580 30.189 1.08e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01643 - - gmx:100777569 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01643 19 45816498 45826805 Gma03g01595 03 42193956 42200580 GST
Gma19g01643 19 45816498 45826805 Gma10g00421 10 4041827 4047287 PCT
Gma19g01643 19 45816498 45826805 Gma13g01128 13 25421760 25426781 PCT
Gma10g00421 10 4041827 4047287 Gma19g01643 19 45816498 45826805 PCT
Gma13g01128 13 25421760 25426781 Gma19g01643 19 45816498 45826805 PCT