Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01595 ATGAGAACAGAATCAAAGAAGACATCTAAGTCTTCGTGGCCAAAATTAGCCAAGTGGCTCAATATAACGAGTAGTGCTGAGAAGTTTCGCTCAGACTATGATGCAGCAACAACAGCAGCAACTGCGAAGGAAAGGAGAAAGAGTTGTTCCGACCAAGATCGTTACGTCGACGTACCGGATGATTTATCAGAGGGGTGGATGATGGATTCTACAAGCGGAATGAAGAAAAAATCAGCTCCTGGCACTGGGGGTCTGGAACTTAGGATGTTCGTGGGGACGTGGAATGTCGGAGGGAAGTCACCGAACGAAGGCTTGAATTTGAGGAATTGGCTTACGTGTCCTTCCCCAGCTGACATCTATGTTATAGGGTTCCAAGAAATTGTACCGCTAAATGCGGGGAACGTGCTTGGGCCGGAGGACAGTGGCCCAGCAGCGAAGTGGCTGGCCCTTATTCGTGAAGCCTTGAACACCAACAAGTGCGACCATGAAATGTCACACTATTACACCAGCAAGAAGTGTAGGCAGAATTTTTCGGAATTCCTCTCTTTAGATGAGGAGTTGGATAATAATGGAGAAAATTATCCTAAGAGTTTACGACGCTATTGCTTAGCAGCAAGCAAGCAAATGGTTGGTATATTCTTGTCCGTGTGGGTACGAGCGGATCTTTGCAACCATGTTACCAATTTAAAAGTCTCAAGTGTTGGCAGAGGCATCATGGGCTATCTTGGAAATAAGGGTTCAACATCAATTAGCATGACATTGTACAACACCACCTTCTGTTTCGTTTGCACCCACTTGGCCTCTGGGGAGAAATTTGGTGATGAGTTGCGAAGGAACTTGGACGTCTCGGAAATCTTGAAGAAAACTAAGTTTTGTCACTCATTTAAATCTCTTGTTCATCCACTCTCTCCTGAAAGCATACTAGAACACGATAATATTATTTGGCTTGGCGATTTGAATTATCGGCTAGCTGCTGGCTACGATGACACGCATGAACTACTAAAGAAGAATAATTGGCAGGCATTACTAGAAAAGGATCAGCTAAGGATAGAGCAGAAAGCTGGTAGAGTATTCAATGGTTGGAATGAAGGGAACATATACTTTGCTCCTACTTATAAATACTTGACCAATTCTGACCACTATGTTGCCCAATCCTCCCAATCCAAGGAAAAACGACGAACTCCTGCTTGGTGTGATCGAATATTGTGGAAAGGGGAAGGCCTGAATCAGATGTGGTATGTACGAGGAGAGTCCAGATTCTCAGATCACAGGCCAGTGTATTCACTATTCTCTGTTCAAGTTGACATGAAAAGCAAGAATATAGCTCCCTCTACTGCCACATTGCCTATTTGTTGTCCCTTAAAACCGTTGACAAATTCTTCGTTGTCATCGACTTGTTGCGCTACGAAAGTCCAGGCAGAAGAGCAACTCTTGCTGCTAACTAGGGCACAAAGTTGCATAGACACCGTACCTAGGTTTTGA 1482 0.444 MRTESKKTSKSSWPKLAKWLNITSSAEKFRSDYDAATTAATAKERRKSCSDQDRYVDVPDDLSEGWMMDSTSGMKKKSAPGTGGLELRMFVGTWNVGGKSPNEGLNLRNWLTCPSPADIYVIGFQEIVPLNAGNVLGPEDSGPAAKWLALIREALNTNKCDHEMSHYYTSKKCRQNFSEFLSLDEELDNNGENYPKSLRRYCLAASKQMVGIFLSVWVRADLCNHVTNLKVSSVGRGIMGYLGNKGSTSISMTLYNTTFCFVCTHLASGEKFGDELRRNLDVSEILKKTKFCHSFKSLVHPLSPESILEHDNIIWLGDLNYRLAAGYDDTHELLKKNNWQALLEKDQLRIEQKAGRVFNGWNEGNIYFAPTYKYLTNSDHYVAQSSQSKEKRRTPAWCDRILWKGEGLNQMWYVRGESRFSDHRPVYSLFSVQVDMKSKNIAPSTATLPICCPLKPLTNSSLSSTCCATKVQAEEQLLLLTRAQSCIDTVPRF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01595 493 Gene3D Endonuclease/exonuclease/phosphatase 69 447 IPR036691 -
Gma03g01595 493 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 11 482 IPR045849 GO:0004445|GO:0046855
Gma03g01595 493 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 11 482 - -
Gma03g01595 493 Pfam Endonuclease/Exonuclease/phosphatase family 92 423 IPR005135 GO:0003824
Gma03g01595 493 SMART i5p_5 85 438 IPR000300 GO:0016791|GO:0046856
Gma03g01595 493 SUPERFAMILY DNase I-like 86 437 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01595 Gma-Chr3 42193956 42200580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01595 87 434 Acyl Lipid Metabolism Gene Families AT1G65580 29.219 2.80e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01595 - - gmx:100800223 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01643 19 45816498 45826805 Gma03g01595 03 42193956 42200580 GST
Gma03g01595 03 42193956 42200580 Gma10g00421 10 4041827 4047287 PCT
Gma03g01595 03 42193956 42200580 Gma13g01128 13 25421760 25426781 PCT
Gma10g00421 10 4041827 4047287 Gma03g01595 03 42193956 42200580 PCT
Gma13g01128 13 25421760 25426781 Gma03g01595 03 42193956 42200580 PCT