Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01128 ATGAGAACAGAGTTGAAGAAGAAGATATCCAAGTCTTCATGGCCAAAATTTAATGTAAGAAAGTGGCTCAATATAAGGAGCAACGATGATAAATTTCACTCAGATGCGTCATATTACTCTTTACCAGAGGGGTGGCTGATGGACTCCACAAATGAATTGAAACATTCGGCATCAGTGATGGAGGCACCATCTGTCATTGACATTGACACGCTCAACCTTAGGATGTTCGTGGGGACTTGGAATGTTGGAGGAAAGTCACCCAACGAGGGATTGAACTTGAGGGATTGGTTGATGTTGCCTTCACAAGCTGACATCTATGTCATTGGGTTCCAAGAAATTATACCTCTAAACGCAGGAAACGTGCTTGGGCCAGAGGACAGTGGCCCAGCATCGAAATGGCTGAACCTTATTCGTCAAGCCTTGAACTCTAACACAAGCTCCAGTGGAGAAAATTCTCCTACATCGTCTTTTAACAGTAGAAGGCAATGCTGCCCAAATGAACAACACTATTATTGCCTAGCAGCAAGCAAACAAATGGTGGGTATCTTCTTGTGTGTGTGGGTACGTGCGGATCTTTACAAGCATGTCAGCAAGTTAAAGGTGTCTTGTGTTGGTAGAGGCATCATGGGCTATCTAGGAAATAAGGGTTCAATATCAATTAGCATGACATTGTACCACACAACGTTCTGCTTCGTTTGTACCCACTTGGCCTCCGGAGAGAAAGATGGTGATGAGGTGCGAAGAAATTTGGACGTTTCAGAGATATTAAAGAAAACTAAATTTTCACACTCATTCAAAGCACTTGGCCAACCACTCCCTCCTGAAAGCATATTAGAGCATGATAAGATAATTTGGCTTGGGGATTTGAATTATCGCCTTGCTGCTGCTTACGATGATACACTTGGGCTGCTGAAGAAGAATGATTGGCAGGCACTATTAGAGAAGGATCAGCTAAGGATAGAGCAGAGAGCTGGTCGAGTATTCAAAGAGTGGAAGGAAGGGAAGATATACTTTGCTCCAACTTACAAATATTTATTTGATTCTGACCAATATGTTGCCCAAACTAACAAGTCCAAGGAAAAACGACGAACTCCGGCTTGGTGTGATCGAATTCTATGGAGAGGTGAAGGCGTGGAGCAGCTATGGTATGTGCGAGGAGAGTCCAAATTCTCAGACCACAGGCCAGTGTATTCACTATTCTCGGTTGACGTGGACTTGACATGTAACAAGCTAAGTAGTCCCTCTATTGCTGCATCAGATAGCAGCTCAATAATCTCAACAAGGTCGTGTTCCTCTAGACCCTTAACAAACGCTGCCTTGTCCTCATCTTGCTTTGCTAAAGTTCAGGCTGAGGAACAACTTTTGTTACTAACCAGGGTACATAGACACAGGGTTCTGACTTAG 1404 0.4366 MRTELKKKISKSSWPKFNVRKWLNIRSNDDKFHSDASYYSLPEGWLMDSTNELKHSASVMEAPSVIDIDTLNLRMFVGTWNVGGKSPNEGLNLRDWLMLPSQADIYVIGFQEIIPLNAGNVLGPEDSGPASKWLNLIRQALNSNTSSSGENSPTSSFNSRRQCCPNEQHYYCLAASKQMVGIFLCVWVRADLYKHVSKLKVSCVGRGIMGYLGNKGSISISMTLYHTTFCFVCTHLASGEKDGDEVRRNLDVSEILKKTKFSHSFKALGQPLPPESILEHDKIIWLGDLNYRLAAAYDDTLGLLKKNDWQALLEKDQLRIEQRAGRVFKEWKEGKIYFAPTYKYLFDSDQYVAQTNKSKEKRRTPAWCDRILWRGEGVEQLWYVRGESKFSDHRPVYSLFSVDVDLTCNKLSSPSIAASDSSSIISTRSCSSRPLTNAALSSSCFAKVQAEEQLLLLTRVHRHRVLT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01128 467 Pfam Endonuclease/Exonuclease/phosphatase family 78 393 IPR005135 GO:0003824
Gma13g01128 467 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 11 454 IPR045849 GO:0004445|GO:0046855
Gma13g01128 467 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 11 454 - -
Gma13g01128 467 SMART i5p_5 71 409 IPR000300 GO:0016791|GO:0046856
Gma13g01128 467 SUPERFAMILY DNase I-like 69 404 IPR036691 -
Gma13g01128 467 Gene3D Endonuclease/exonuclease/phosphatase 54 423 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01128 Gma-Chr13 25421760 25426781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01128 72 404 Acyl Lipid Metabolism Gene Families AT1G65580 31.414 9.86e-42 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01128 - - gmx:100792720 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00421 10 4041827 4047287 Gma13g01128 13 25421760 25426781 GST
Gma19g01643 19 45816498 45826805 Gma13g01128 13 25421760 25426781 PCT
Gma03g01595 03 42193956 42200580 Gma13g01128 13 25421760 25426781 PCT
Gma13g01128 13 25421760 25426781 Gma19g01643 19 45816498 45826805 PCT
Gma13g01128 13 25421760 25426781 Gma03g01595 03 42193956 42200580 PCT