Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00421 ATGAGAACAGAGTTGAAGAAGAAGATATCCAAGTCTTCGTGGCCAAAATTTAATGTAAGAAAGTGGCTCAATATTAGGAGCAACGATGATAACTTTCACTCAGATTACTCTTTACCGGAGGGGTGGCTGATGGACTCCACAAATGAATTGAAACATTCTGCATCAGTGATGGAGGCGCCACCTGTCAATGACACTGACACGCTCAACCTTAGGATGTTCGTGGGGACGTGGAATGTTGGAGGAAAGTCTCCGAACGAGGGATTGAACTTGAGGAATTGGTTGATGTTGCCTTCACCAGCTGATATCTATGTCATTGGGTTCCAAGAAATTATACCTCTAAACGCAGGGAACGTGCTTGGACCAGAGGATAGTGGACCAGCATCGACGTGGTTGAACCTTATTCATCAAGCCTTGAACTCTAACACAAGCTCCTCCAGTGGAGAAAATTCTCCTACATGCAGTCCAAGTGAACATGAACAACAGCTCTATTATTGCCTAGCAGCAAGTAAACAAATGGTGGGTATCTTCTTGTGCTTGTGGGTACGTGCGGATCTTTACAAGCATGTCAGCAATTTAAAGGTGTCTTGTGTTGGTAGAGGCATCATGGGCTATCTTGGAAATAAGGGATCAATCTCAATTAGCATGACATTGTACCACACAACGTTCTGCTTCGTTTGTACCCACTTGGCCTCCGGAGAGAAAGATGGTGATGAGGTGCGAAGAAATTTGGACGTCTCAGAAATCTTAAAGAAAACTAAATTTTCACAATCATTCAAAGCTCTTGGTCAATCACTCCCTCCTGAAAGCATATTAGAGCATGATAAGATTATTTGGCTAGGGGATTTGAATTATCGGCTTACTGCTGGTTACGATGATACACTTGAGCTACTGAAGAAGAATGATTGGAAGGCACTATTAGAGAAGGACCAGCTAAGGATAGAGCAGAGAGCTGGTCGAGTGTTCAAAGAGTGGAAGGAAGGGAAGATATATTTTGCTCCAACTTACAAATACTTATTCGGTTCTGACCAGTATGTTGCCCAAACTAACAAGTCCAAAGAAAAACGACGAACTCCGGCTTGGTGCGATCGAATACTATGGAAAGGTGAAGGCGTGGAGCAGCTATGGTATGTGCGAGGAGAATCCAAATTCTCAGACCATAGGCCAGTGTATTCACTTTTCTCGGTTAACGTGGACTTAACATCTAACAAGCTAAGTCCTTCTATTGCTACATCAAATAGCAGCTCTATAATCTCAAGGTCGTGTTCCTCTAGACCCTTAACAAACGCTGCCTTGTCCTCATCTTGCTTTGCTAAAGTTCAGGCAGAGGAACAACTCTTGTTACTAACCAGGGCACATAGACACAGGGTTCTGACTTAG 1377 0.435 MRTELKKKISKSSWPKFNVRKWLNIRSNDDNFHSDYSLPEGWLMDSTNELKHSASVMEAPPVNDTDTLNLRMFVGTWNVGGKSPNEGLNLRNWLMLPSPADIYVIGFQEIIPLNAGNVLGPEDSGPASTWLNLIHQALNSNTSSSSGENSPTCSPSEHEQQLYYCLAASKQMVGIFLCLWVRADLYKHVSNLKVSCVGRGIMGYLGNKGSISISMTLYHTTFCFVCTHLASGEKDGDEVRRNLDVSEILKKTKFSQSFKALGQSLPPESILEHDKIIWLGDLNYRLTAGYDDTLELLKKNDWKALLEKDQLRIEQRAGRVFKEWKEGKIYFAPTYKYLFGSDQYVAQTNKSKEKRRTPAWCDRILWKGEGVEQLWYVRGESKFSDHRPVYSLFSVNVDLTSNKLSPSIATSNSSSIISRSCSSRPLTNAALSSSCFAKVQAEEQLLLLTRAHRHRVLT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00421 458 Pfam Endonuclease/Exonuclease/phosphatase family 75 386 IPR005135 GO:0003824
Gma10g00421 458 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 38 446 IPR045849 GO:0004445|GO:0046855
Gma10g00421 458 Gene3D Endonuclease/exonuclease/phosphatase 51 420 IPR036691 -
Gma10g00421 458 SUPERFAMILY DNase I-like 65 398 IPR036691 -
Gma10g00421 458 SMART i5p_5 68 401 IPR000300 GO:0016791|GO:0046856
Gma10g00421 458 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 38 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00421 Gma-Chr10 4041827 4047287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00421 69 397 Acyl Lipid Metabolism Gene Families AT1G65580 31.217 9.35e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00421 - - gmx:100795297 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00421 10 4041827 4047287 Gma13g01128 13 25421760 25426781 GST
Gma19g01643 19 45816498 45826805 Gma10g00421 10 4041827 4047287 PCT
Gma03g01595 03 42193956 42200580 Gma10g00421 10 4041827 4047287 PCT
Gma10g00421 10 4041827 4047287 Gma19g01643 19 45816498 45826805 PCT
Gma10g00421 10 4041827 4047287 Gma03g01595 03 42193956 42200580 PCT