Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01620 atggaggaagcgctggaactgtcacgcgccaaggacacgaaggagaggatggcgggcgtggagcgcctccaccaacttctagaagcttccagaaagagcctatcctcttCCGAGGTCACCTCGCTCGTCGATACGTGTATGGATCTCCTCAAGGACAACAACTTCCGCGTCTCCCAGGGCGCGCTCCAGGCCCTCGCCTCCGCCGCCGTCCTCGCCGGCGAACACTTCAAGCTCCACTTCAACGCCCTCCTCCCCGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCGCGCCGCCTCCTCCTCACTCTCATGGAGGTAGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTTAGAGAAGAGTTTACACGAACTGTCACGGCTGCAATTAATCTATTTGCATCTACTGAGCTTCCACTCCAACGGGCTATCCTCCCCCCTGTTTTGCATTTGCTTAATGATCCAAATCCTGCTGTAAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATACACAAGCTGGACCTCAATTTCGTGACGAACTTCATCGCCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTTGAGGGAATCCAACCAAAAGTTCGCTCTTCCGATGGCATTCCAGGTGGATATATTACTGGGGAAATTAAACATGTAAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCAAGGGAGAACTCTCTTTTTGGAGGAGAAGGTGACATCACTGAGAAACCCATAGACCCTGTCAAGGTATATTCAGATAAGGAGTTAATCAGGGAATTTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCAATTCGAATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTCTTGGAGGTGCTGTGGATTATCCATGTTTTTGTGGGCTCCTGAAGCAACTTGTTGGACCTTTAACCACACAATTGTCAGACCGAAGATCTACCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAGGCATGTGCTGAAATGTTGATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCCGATTGTGCAAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTTATTTGGTCCTAGAACATTGGCCTGATGCACCAGAAATACATCGATCAGCTGATTTATATGAGGATCTGATAAAGTGTTGTGTTTCAGACGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCCAAAACTTGGCCTGAGCGTTCTCGTCGCCTATTTTCATCCTTTGACCCTGCTATTCAACGGTTAATAAATGAAGAGGATGGGGGAATGCATCGGCGACATGCTTCACCTTCCATTCGAGATAGAGGTGCACTGATGTCATTATCTAGCCAGGCCTCTGCTCCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTTGCGATGGATAGAAGTTCAAGTATATCATCAGGGACATCTATCTCATCTGGCATACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGCATGTTACATGCAAGCAAACAGAAGGTTTCTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTCATCTTCTCTCCGGTCAACAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCTGCTGTCCCCGCATCTAATCATCTGACAAGCTCTTTAACAGAATCAACTACTTCTGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTTGGTTTGTCTGACATAATCACTCAGATTCAAGCTTCGAAAGATTCGGCCAAGTTATCCTATCGTAGCAATGTTGGTATCGAGCCTTTATCATCATTATCATCATATTCGAGTAAAAGGGCATCTGACAGACAAGAAAGAAGTTCTCTTGATGATAACAATGATATGAGGGAGACTAGGCGATATATGAACCCCAACACTGATAGGCAGTATTTGGATGCCCCTTATAGAGATGGAAACTTTAGGGAATCTCATAATAGTTATGTGCCTAATTTCCAGAGACCACTATTGAGAAAGAATGTGGCTGGACGCATGTCTGCTAGCAGGAGGAGGAGTTTTGATGATAATCAGCTATCTCTTGGAGAGATGTCAAATTTTGCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCCAATTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCAGATATTGTTCCAGTATGCCGAAAGCCATTTGAGGGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTCAGGCAGCCATGTTCAACAACTCTGGAAGTTGTCAGCAAAACTTACAGTATAGATTCTCTCTTACCTGCATTATTACGCTCACTAGATGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCTATCAATTCCTTTAACAAACATGCTATGAATCCAGAAGGTGCTGCGAATATTGGCATCCTAAAATTATGGCTTGCTAAGTTAACCCCTTTGGTCAATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACCTGCATTATATCAGTGTACTCTCACTTTGATTCGACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCCTTGAGACGAGCATTGAAACAATACACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAAAACAAGAAAGAGAAACAACGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACATCCTCTGAAGATGGATATGTTGGTTACTCTAGGAAAGCTCATTACCTTGGTAAGTATTCTGCTGGTTCCCTTGATGGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCAACACTGATAAAAGCCAGTCTTGGTCAAGCATCTTCTGGTGAAACTCGGGAACATCTGTATCATAATTTTGAGACTGATCCTAACAGTGGTAGTCTTGGTTCAAAAACTAAGGATCTTGCTTATGCAGTCAATCCGATGGGTCAAAACATTGGCTCTCAAACTAGCCAACATGGACATGTGGACAGTAGCGTGAGCTTAGAGGGTCTTTCCATTCCTCGTCTAGATGTAAACGGTTTGATGCCATCAGAGCATTTAAATGGTACTGAAGGCTATGTAAATGACAAAGAGCATCCTTCTGAATTGGAACGTAATCATCACTCAGCTGAAGATGTAAAGATTAACTCTATGACAGACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTTCAACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTAGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAAACCAGAAAGGTGCCGTGGAGAATTCTGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCATTCCTAAGGTCTCGAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACGCTCGTTATTTGCATAAATTGCTTAACAAAGCTTGTGGGGCGGCTTTCTCAGGAGGAACTGATGACTCAGTTACCCTCGTTTCTGCCTGCTCTTTTCGAAGCTTTTGGTAACCAGAGTACAGATGTTCGGAAGACCGTTGTTTTCTGTCTCGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCAAAGCAATTGATGCCGTTCAAGACTAG 4338 0.4214 MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLAGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTAAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGIPGGYITGEIKHVSVNPKKSSPKAKSSSRENSLFGGEGDITEKPIDPVKVYSDKELIREFEKIASTLVPEKDWSIRIAAMQRVEGLVLGGAVDYPCFCGLLKQLVGPLTTQLSDRRSTIVKQACHLLCFLSKELLGDFEACAEMLIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYAYLVLEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGMHRRHASPSIRDRGALMSLSSQASAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSSLRSTSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTESTTSGINKGSNRNGGLGLSDIITQIQASKDSAKLSYRSNVGIEPLSSLSSYSSKRASDRQERSSLDDNNDMRETRRYMNPNTDRQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSASRRRSFDDNQLSLGEMSNFADGPASLHEALSEGLSSGSNWSARVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPVCRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVNDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKEKQRSKSSYDPSDVVGTSSEDGYVGYSRKAHYLGKYSAGSLDGDGGRKWSSQDSTLIKASLGQASSGETREHLYHNFETDPNSGSLGSKTKDLAYAVNPMGQNIGSQTSQHGHVDSSVSLEGLSIPRLDVNGLMPSEHLNGTEGYVNDKEHPSELERNHHSAEDVKINSMTDTGPSIPQILHMICSGGDGSPISSKRTALQQLVEASITNDHSVWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGAVENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMTQLPSFLPALFEAFGNQSTDVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDAVQD 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01620 1445 MobiDBLite consensus disorder prediction 636 660 - -
Gma19g01620 1445 MobiDBLite consensus disorder prediction 247 262 - -
Gma19g01620 1445 Pfam CLASP N terminal 285 501 IPR024395 -
Gma19g01620 1445 Pfam CLASP N terminal 58 188 IPR024395 -
Gma19g01620 1445 Pfam CLASP N terminal 802 996 IPR024395 -
Gma19g01620 1445 ProSiteProfiles HEAT repeat profile. 161 199 IPR021133 -
Gma19g01620 1445 Gene3D - 796 1020 IPR011989 -
Gma19g01620 1445 PANTHER PROTEIN, PUTATIVE-RELATED 28 1437 - -
Gma19g01620 1445 SUPERFAMILY ARM repeat 7 403 IPR016024 -
Gma19g01620 1445 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Gma19g01620 1445 MobiDBLite consensus disorder prediction 603 660 - -
Gma19g01620 1445 MobiDBLite consensus disorder prediction 701 725 - -
Gma19g01620 1445 MobiDBLite consensus disorder prediction 244 268 - -
Gma19g01620 1445 MobiDBLite consensus disorder prediction 603 620 - -
Gma19g01620 1445 SMART TOG_3 3 225 IPR034085 -
Gma19g01620 1445 SMART TOG_3 1201 1437 IPR034085 -
Gma19g01620 1445 SMART TOG_3 780 1029 IPR034085 -
Gma19g01620 1445 SMART TOG_3 271 515 IPR034085 -
Gma19g01620 1445 Gene3D - 1228 1437 IPR011989 -
Gma19g01620 1445 Gene3D - 1 222 IPR011989 -
Gma19g01620 1445 MobiDBLite consensus disorder prediction 694 733 - -
Gma19g01620 1445 PANTHER CLASP 28 1437 - -
Gma19g01620 1445 SUPERFAMILY ARM repeat 290 1435 IPR016024 -
Gma19g01620 1445 Gene3D - 268 508 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01620 Gma-Chr19 45642692 45656762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01620 K16578 - gmx:100820523 2758.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01620 19 45642692 45656762 Gma19g01620 19 45642692 45656762 ECH
Gma19g01620 19 45642692 45656762 Gma03g01567 03 41956061 41972446 GST
Gma19g01620 19 45642692 45656762 Gma10g00397 10 3815431 3845418 PCT
Gma19g01620 19 45642692 45656762 Gma13g01102 13 25177447 25201845 PCT
Gma10g00397 10 3815431 3845418 Gma19g01620 19 45642692 45656762 PCT
Gma13g01102 13 25177447 25201845 Gma19g01620 19 45642692 45656762 PCT