Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01567 atggaggaagctctggaactgtcacgcgccaaggacacgaaggagaggatggcgggcgtagagcggctgcatcaacttctagaagtttccagaaagagcctctcctcttccgaaGTCACCTCGCTCGTCGACACATGTATGGATCTCCTCAAGGACAACAACTTCCGCGTCTCCCAGGGCGCTCTCCAGGCCCTCGCCTCCGCCGCCGTCCTCGCCGGTGAACACTTCAAGCTCCACTTCAACGCCCTCCTCCCCGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCCCGTCGGCTCCTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTCAGAGAGGAGTTTACACGAACTGTCGCAGCTGCAATTAATCTATTTGCAGCTACTGAGCTTCCACTTCAACGAGCTATCCTCCCCCCTGTTTTGCATTTGCTTAATGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATACACAAGCTGGACCTCAATTTCGTGACGAACTTCACCGCCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTCGAGGGAATTCAACCAAAAGTTCGCTCTTCGGATGGTCCAGGTGGATATATTACTGGGGAAATTAAACATGCAAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCAAGGGAGAACTCTCTTTTTGGAGGAGAAGGTGACATCACTGAGAAACCCGTAGACCCTGTCAAGGTATATTCAGATAAGGAGTTAATCAGGGAATTTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCAATTCGAACTGCTGCTCTGCAGAGAGTTGAAGGTCTTGTTCTTGGAGGTGCTGTGGATTATCCATGTTTTCGTGGGCTCCTGAAGCAACTTGTTGGACCTTTAAGCACACAATTGTCAGACCGAAGATCTACCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAGGCATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCCGATTGTGCAAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTTATTTGGTCCTAGAACATTGGCCTGATGCACCTGAAATACATCGATCAGCTGATTTATATGAGGATCTGATAAAGTGTTGTGTTTCAGACGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGTCGCCTATTTTCATCCTTTGACCCTGCGATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACATCGACGACATGCTTCACCTTCCATTCGAGATAGAGGTGCACCGACGTCATTATCTAGCCAGGCCTCTGCTCCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTTGCTATGGATAAAAGTTCAAGTATATCATCAGGGACATCTATCTCATCTGGCATACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGCATGTTACATGCAAGCAAACAGAAGGTTTCTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTCATCTTCTCTCCGGTCAACAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCAGCTGTCCCCGCATCTAATCATCTGACAAGCTCTTTAACAACAGAATCAACTACTTCCGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTCGGTTTGTCTGACATAATCACTCAGATTCAAGCTTCGAAAGATTCTGCCAAGTTATCCTATCGTAGTAATGTTGGTATTGAGCCTTTATCATCATATTCGAGTAAAAGGGCATCTGAAAGACAAGAAAGAAGTTCTCTCGATGATAACCATGATATGAGGGAGACTAGGCGATATATGAACCCCAACACTGATAGACAGTATTTGGATGCCCCTTATAGAGATGGAAACTTTAGGGAATCTCATAATAGTTATGTGCCTAATTTCCAGAGACCACTATTGAGAAAGAATGTGGCTGGACGCATGTCTGCTGGCAGGAGGAGTTTTGATGATAATCAGCTATCTCTTGGAGAGATGTCGAATTTTGCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCCGATTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGTCCGAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCAGATATTGTTCCAGCATGCCGAAAGCCTTTTGAGGGTTATATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTCAGGCAGCCGTGTTCAACAACTCTGGAAGTGGTCAGCAAAACTTACAGTATAGATTCTCTCTTACCTGCATTATTACGCTCACTAGATGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCTATCAATTCCTTTAACAAACATGCTATGAACCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCTAAGTTAACCCCTTTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTGTACTCTCACTTTGATTCAACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCCTTGAGACGAGCATTGAAACAATACACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAGAACAAGAAAGAGAAACAACGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACATCCTCTGAAGATGGATATGTTGGTTACTCTAGGAAAGCTCATTACCTTGGTAGGTATTCTGCTGGTTCACTTGATAGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCAACACTGATAAAAGCCAGTCTTGGTCAAGCATCTTCTGGTGAAACTCGGGAACATCTGTATCATAATTTTGAGACTGATCCTAATAGTGGCAGCCTTGGTTCAAAAACTAAGGATCTTGCTTATGCCGTCAATCCAATGGGTCAAAACTTTGGCTCTCAAACTAGCCAACATGGACACATGGACAGTAGCGTGAGCTTAGAGGGTCTTTCAACTCCTCGTCTAGATGTAAACGGTTTGATGTCATCAGAGCATTTAAATGGTGCTGAAGGCTATGTAAATGACAAAGAGCATCCTTCTGAATTGGAACTTAATCATCACTCAGCTGAAGATGTAAAAATTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTTCAACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAAACCAGAAAGGTGCCATGGAGAACTCTGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCATTCCTAAGGTCTCGAATGAAGCAGAGCACTGCCTGACCATTGTTCTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTCTGCTGGTTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGCTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTTCTGCCTGCCCTTTTCGAAGCTTTTGGTAACCAGAGTGCAGATGTTCGGAAGACCGTTGTTTTCTGTCTCGTGGATATTTATATCATGCTTGGGAGAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCAAAGCGATTGATGCCGTTCAAGACTAG 4323 0.4226 MEEALELSRAKDTKERMAGVERLHQLLEVSRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLAGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVAAAINLFAATELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGPGGYITGEIKHASVNPKKSSPKAKSSSRENSLFGGEGDITEKPVDPVKVYSDKELIREFEKIASTLVPEKDWSIRTAALQRVEGLVLGGAVDYPCFRGLLKQLVGPLSTQLSDRRSTIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYAYLVLEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGIHRRHASPSIRDRGAPTSLSSQASAPSNLPGYGTSAIVAMDKSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSSLRSTSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTTESTTSGINKGSNRNGGLGLSDIITQIQASKDSAKLSYRSNVGIEPLSSYSSKRASERQERSSLDDNHDMRETRRYMNPNTDRQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRSFDDNQLSLGEMSNFADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKEKQRSKSSYDPSDVVGTSSEDGYVGYSRKAHYLGRYSAGSLDSDGGRKWSSQDSTLIKASLGQASSGETREHLYHNFETDPNSGSLGSKTKDLAYAVNPMGQNFGSQTSQHGHMDSSVSLEGLSTPRLDVNGLMSSEHLNGAEGYVNDKEHPSELELNHHSAEDVKINTMTHTGPSIPQILHMICSGGDGSPISSKRTALQQLVEASITNDHSVWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGAMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGRAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDAVQD 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01567 1440 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Gma03g01567 1440 MobiDBLite consensus disorder prediction 691 719 - -
Gma03g01567 1440 Pfam CLASP N terminal 283 499 IPR024395 -
Gma03g01567 1440 Pfam CLASP N terminal 797 991 IPR024395 -
Gma03g01567 1440 MobiDBLite consensus disorder prediction 697 719 - -
Gma03g01567 1440 SMART TOG_3 269 513 IPR034085 -
Gma03g01567 1440 SMART TOG_3 1193 1432 IPR034085 -
Gma03g01567 1440 SMART TOG_3 3 224 IPR034085 -
Gma03g01567 1440 SMART TOG_3 775 1024 IPR034085 -
Gma03g01567 1440 MobiDBLite consensus disorder prediction 601 618 - -
Gma03g01567 1440 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Gma03g01567 1440 MobiDBLite consensus disorder prediction 601 660 - -
Gma03g01567 1440 SUPERFAMILY ARM repeat 7 401 IPR016024 -
Gma03g01567 1440 MobiDBLite consensus disorder prediction 218 266 - -
Gma03g01567 1440 MobiDBLite consensus disorder prediction 518 532 - -
Gma03g01567 1440 Gene3D - 791 1015 IPR011989 -
Gma03g01567 1440 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Gma03g01567 1440 PANTHER PROTEIN, PUTATIVE-RELATED 28 1432 - -
Gma03g01567 1440 Gene3D - 1223 1432 IPR011989 -
Gma03g01567 1440 Gene3D - 1 221 IPR011989 -
Gma03g01567 1440 Gene3D - 266 505 IPR011989 -
Gma03g01567 1440 MobiDBLite consensus disorder prediction 245 260 - -
Gma03g01567 1440 PANTHER CLASP 28 1432 - -
Gma03g01567 1440 SUPERFAMILY ARM repeat 288 1430 IPR016024 -
Gma03g01567 1440 MobiDBLite consensus disorder prediction 634 660 - -
Gma03g01567 1440 MobiDBLite consensus disorder prediction 502 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01567 Gma-Chr3 41956061 41972446 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01567 K16578 - gmx:100796697 2779.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01567 03 41956061 41972446 Gma03g01567 03 41956061 41972446 ECH
Gma19g01620 19 45642692 45656762 Gma03g01567 03 41956061 41972446 GST
Gma03g01567 03 41956061 41972446 Gma10g00397 10 3815431 3845418 PCT
Gma03g01567 03 41956061 41972446 Gma13g01102 13 25177447 25201845 PCT
Gma10g00397 10 3815431 3845418 Gma03g01567 03 41956061 41972446 PCT
Gma13g01102 13 25177447 25201845 Gma03g01567 03 41956061 41972446 PCT