Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00397 ATGTCAAGAATGAGAGTGGTCCTCATGATCCTCACCCTGGTGGTGGTGACACTTCTCATCAACACAAAGAGTGTTGAAAGTGCTCGCACTTTCTTTGTGTTCGGGGACTCTCTGGTTGACAGTGGCAACAACAATTACTTGCCGACCACCGCACGCGCCGACTCTCCTCCCTATGGCATCGACTATCCCACCCGTCGCCCCACCGGCCGCTTCTCCAATGGCTACAACCTCCCTGACCTTATCAGCCAGCATATTGGGTCTGAACCCACGTTACCATACTTGAGCCCTGAACTCACCGGACAAAAGCTATTAGTTGGGGCCAATTTCGCTTCCGCAGGGATAGGAATCCTTAACGACACCGGCATCCAATTTGTGGGGATCTTACGAATGTTCCAGCAGTATGCGTTGTTCGAGCAGTACCAGCAACGGTTAAGTGCAGAAGTGGGAGCAACGCAGACACAACGAATCGTGAATGGTgcactgttcctgatgactctgggtggtaacgacttcgttaacaactattttctcactcctgtctctgccaggtctcgccaattcactgtcccccagtattgtcgttacctcatcaccgagtatcgtaaaattctcatgaggttgtatgagttgggtgctagaagggttcttgtgaccggaactggtccattgggctgtgttcctgctcagcttgctacaaggagtagtaacggagagtgcgtgcctgagttacaacaagctgcacaaattttcaacccacttctggtccaaatgactagagaaatcaactcccaagtgggctctgacgtttttgttgctgtcaatgccttccaaatgaacatgaacttcatcaccgaccctcaaagatttggttttgttacatcaaagatagcctgttgtggacaagATCTGCACCCGGCCGTGCCAGATCCGATGGAGGAAGCGCTCGAGCTCGCACGCGCGAAGGACGCGAAGGAGCGCATGGCGGGCGTGGAGCGCCTCCACGAGGTGCTGGAAGCTTCCAGAAGGAGCCTCAGCTCCGGTGGGGTCACTTCTCTCGTCGATTGCTGCTTGGATCTCTTGAAGGACAGCAGCTTCAAGGTCTCGCAGGGCGCGCTCCAGGCTCTCGACTCCGCCGCCGTGCGCGCCGGTGACCACTTCAAGCTCCACTTCAACGCGCTGGTCCCTGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCCAGGCGGCTCCTTCTCACTCTCATGGAGGTTTCATCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACAAGCAGAAGCTGGAGAGTCAGAGAGGAATTTGCACGAACAGTCACATCTGCAATTGGTCTATTTTCATCTACTGAGCTTCCCCTTCAACGTGCTATTCTTCCTCCTATTTTGCAGTTGCTGAATGATCTGAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGTATTGAGGAAATGTATACACAAGCTGGGTCCCAATTTCGTGATGAACTTCAGCGCCACAATCTCCCTTCATCTTTGGTGAAAGCTATTAATGCTAGGCTAGAGGGAATTCAACCAAATGTTTGCTCTTCAGATGGTATTTCTAGCGGTTATAATGCTGGGGAAATTAAGCCTGTGGGTGTTAATCCCAAGAAAAGTAGTCCAAAGCATAAAAGTTCATCAAGGGAGACCTCTCTTTTTGGAGCAGGAGAAGGTGATGCCACAGAGAAACTCATAGACCCCATCAAGGTGTATTCAGAGAAGGAGTTAATCAGAGAAATTGATAAGATTGCTTCTACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTGCTGATTATCCATGTTTCTTTGGACTCCTGAAGCAGCTTGTTGGACCTTTAAGCACACAATTGTCAGATCGAAGGTCAAGCATTGTGAAGCAGGCTTGCCATCTATTATGCTTTTTGTCGAAGGACTTCTTGGGTGATTTTGAAGCATGTGCTGAATTGTTCATACCAGTCCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAATCTGCGGACAACTGCATAAAAATGatgttgcacaactgcaaagtagctcgtgtgcttcctcggatagctgattgtgccaaaaatgatcgtaatgctgttctacgtgcaagGTGTTGTGATTATGCTCTTTTGATATTAGAACATTGGCCTGATGCAGCAGAAGTACAACGATCGGCTGATCTATATGAGGATATGATAAGGTGCTGTGTTTCAGATGCAATGAGTGAGGTGCGGTCGACTGCAAGGATGTGTTACAGAATGTTTGCAAAGACTTGGCCAGAACGTTCCCGTCGCCTGTTTTCATCATTTGACCCTGCTATTCAAAGGTTAATCAACGAAGAGGATGGAGGAATGCATAGGCGACATGCATCACCTTCTGTTCGTGATAGAGGTGCACTGATGTCAATAACTACTCAAGCTTCAGCACCCTCTAATCTAACTGGTTATGGAACTTCTGCTATTGTTGCAATGGACCGAAGTTCAAGTTTATCATCGGGGACTTCTATCGCCTCTGGTGTTCTTTCACAAGCCAAGTCACTTGGTAAAGGTACTGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGGGGTTTGGATTTGTTTGATAAGCATGGTTCATCTGCTCTCCGGTCATCGAGCTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCACCATTCCCTGCTGCTGTCACAGCATCTAATCATCTAACTAGCTCTTTAACGACAGAATCAACTGCATCTGGTGCCAATAAAGCTAGTAACCGAAATGGTGGTTTGGGTATGTCTGACATAATCACCCAAATTCAAGCTTCCAAAGATTCTGGCAGGTTATCGCATAATACTAATGTTGGTATTGAGCCTTTATCAACGTTCTCATCATACTCAAGTAAAAGGGTTACTGAAAAGTTGCAAGAGAGAGGTTCTATTGATGAAAACAGTGACATGAGGGAGACTAGATGCTATATGAATCCCAACATAGATAGGCAGTGTATGGATACCCATTATAGAGATGGCAACTATAGGGATTCGCAGCATAGTTATGTGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGTAGCTGGACGTGTGACTACTGGCAGCAGGAGGAGTTTTGATGATAGCCAATTATCTCTTGGAGAGAAGTCAAACTATGTAGATGGCCCAGCATCTCTTCATGAAGCTCTGAGTGAAGGACTTAGCTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCACTCTTTATTGCAGCAAGGCCAAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTTCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTCTCCACACTTGCAGATATTATTCTGGCATTCCGAAAGCCCTTTGAAGGTTACATGGAACGAATGTTACCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTAGTTAGGCAAGCATGCTCAATGAATTTGGAAGTTGTTAGCAAAACATACAGCATAGATTCTCTCCTACCTGCATTGCTACGATCACTAGATGAACAAAGGTCACCAAAGGCAAAATTGGCTGTTATTGAGTTTGCAATAAGTTCGTTTAATAAGCATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAGTCCCATTGGTTCATGATAAAAATACAAAACTTAAAGAAGCAGCTATTACATGCATTATATCAGTATACTCTCACTTTGATTCATCTGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGATGAACAAAATTCTTTGAGACGAGCCCTTAAGCAGCGCACCCCTCGCATTGAAGTAGACTTGATGAATTATCTGCAAAACAAGAAAGAGCGACATTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAGCATCCTCTGAAGAGGGATATGTTGGTTTGTCAAGGAAAGCTCATTATATTGGAAGATATGCTGCTGGTTCACTAGATATTGATGGTAGCAGGAAGTGGAGTTCCCAAGATTCTGCCCTGATTAAAGGCAGTATTGGCCAAGCAGTTTCTGATGAAACTGAAGAACACACTGATTCTAATAGTGGTGTTTATGGTTTCAAAACTAAAGATCTTGCTTACACAGCCAATTCAATGGGTCAAAACTTTGGCTTACAAACTAGCCACAGACATGTGAACAGTAGCATGAATTTTGAAGGTCTATCATCTGATCTGGATGTTAATGGTCTGATGTCATCAGAACATTTAAATATTACTGAAGACTTTGGACCCGACAAAGAACATCCTTCTGAATTGAACCATAATCATCAGTCAGCTGAAGATGTGAACGTAAACTACATGACAGACACTGGACCCAGTATTCCCCAGATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCAGACTGCACTTCAACAGCTAGTTGAAGTGTCTATAGCCAATGAACATTCTATTTGGACTCTGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCATGCTCTATCTCTGATAGTTGAAATGCTTAAAAATCAGAAAGATGCCATGGAAAATTCAGTTGAGATTGTTGTTGAAAAGCTGCTTAATGTTACAAAGGATATTGTTCCCAAGGTCTCAAATGAAGCAGAGCACTGCCTCACCATTGTTTTATCTCAGAATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTACCGAGGATGAGAAAACTCTTGTTACTTGCATAAATTGCTTGACAAAGCTTGTGGGGAGGCTCTCTCAGGAGGAAGTGATGGCTCAGTTACCTTCTTTCCTGCCTGCTTTGTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACCGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTTTTGCCATATTTGGAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTACGCAAATCGTATCTCACAGGCAAGGACAAGAAAATCAATTGATACCACACACGATTAG 5244 0.4014 MSRMRVVLMILTLVVVTLLINTKSVESARTFFVFGDSLVDSGNNNYLPTTARADSPPYGIDYPTRRPTGRFSNGYNLPDLISQHIGSEPTLPYLSPELTGQKLLVGANFASAGIGILNDTGIQFVGILRMFQQYALFEQYQQRLSAEVGATQTQRIVNGALFLMTLGGNDFVNNYFLTPVSARSRQFTVPQYCRYLITEYRKILMRLYELGARRVLVTGTGPLGCVPAQLATRSSNGECVPELQQAAQIFNPLLVQMTREINSQVGSDVFVAVNAFQMNMNFITDPQRFGFVTSKIACCGQDLHPAVPDPMEEALELARAKDAKERMAGVERLHEVLEASRRSLSSGGVTSLVDCCLDLLKDSSFKVSQGALQALDSAAVRAGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTSRSWRVREEFARTVTSAIGLFSSTELPLQRAILPPILQLLNDLNPAVREAAILCIEEMYTQAGSQFRDELQRHNLPSSLVKAINARLEGIQPNVCSSDGISSGYNAGEIKPVGVNPKKSSPKHKSSSRETSLFGAGEGDATEKLIDPIKVYSEKELIREIDKIASTLVPEKDWSIRIAAMQRIEGLVLGGAADYPCFFGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKDFLGDFEACAELFIPVLLKLVVITVLVIAESADNCIKMMLHNCKVARVLPRIADCAKNDRNAVLRARCCDYALLILEHWPDAAEVQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGMHRRHASPSVRDRGALMSITTQASAPSNLTGYGTSAIVAMDRSSSLSSGTSIASGVLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLFDKHGSSALRSSSLDLGVDPPSSRDPPFPAAVTASNHLTSSLTTESTASGANKASNRNGGLGMSDIITQIQASKDSGRLSHNTNVGIEPLSTFSSYSSKRVTEKLQERGSIDENSDMRETRCYMNPNIDRQCMDTHYRDGNYRDSQHSYVPNFQRPLLRKNVAGRVTTGSRRSFDDSQLSLGEKSNYVDGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIILAFRKPFEGYMERMLPHVFSRLIDPKELVRQACSMNLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANIGILKLWLAKLVPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERHSKSSYDPSDVVGASSEEGYVGLSRKAHYIGRYAAGSLDIDGSRKWSSQDSALIKGSIGQAVSDETEEHTDSNSGVYGFKTKDLAYTANSMGQNFGLQTSHRHVNSSMNFEGLSSDLDVNGLMSSEHLNITEDFGPDKEHPSELNHNHQSAEDVNVNYMTDTGPSIPQILHMICSGGDGSPISSKQTALQQLVEVSIANEHSIWTLYFNQILTVVLEVLDDSDSSIREHALSLIVEMLKNQKDAMENSVEIVVEKLLNVTKDIVPKVSNEAEHCLTIVLSQNDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTRKSIDTTHD 1747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00397 1747 ProSiteProfiles HEAT repeat profile. 393 431 IPR021133 -
Gma10g00397 1747 Gene3D - 577 818 IPR011989 -
Gma10g00397 1747 SMART TOG_3 302 534 IPR034085 -
Gma10g00397 1747 SMART TOG_3 581 825 IPR034085 -
Gma10g00397 1747 SMART TOG_3 1091 1339 IPR034085 -
Gma10g00397 1747 SMART TOG_3 1505 1739 IPR034085 -
Gma10g00397 1747 Pfam GDSL-like Lipase/Acylhydrolase 32 304 IPR001087 GO:0016788
Gma10g00397 1747 PANTHER PROTEIN, PUTATIVE-RELATED 337 1739 - -
Gma10g00397 1747 SUPERFAMILY ARM repeat 311 711 IPR016024 -
Gma10g00397 1747 ProSiteProfiles HEAT repeat profile. 470 508 IPR021133 -
Gma10g00397 1747 Coils Coil 1583 1603 - -
Gma10g00397 1747 CDD SGNH_plant_lipase_like 30 300 IPR035669 -
Gma10g00397 1747 Gene3D SGNH hydrolase 20 311 IPR036514 -
Gma10g00397 1747 SUPERFAMILY ARM repeat 599 1737 IPR016024 -
Gma10g00397 1747 MobiDBLite consensus disorder prediction 944 973 - -
Gma10g00397 1747 Gene3D - 1107 1331 IPR011989 -
Gma10g00397 1747 PANTHER CLASP 337 1739 - -
Gma10g00397 1747 Pfam HEAT repeat 470 497 IPR000357 GO:0005515
Gma10g00397 1747 MobiDBLite consensus disorder prediction 549 572 - -
Gma10g00397 1747 MobiDBLite consensus disorder prediction 923 973 - -
Gma10g00397 1747 Pfam Vacuolar 14 Fab1-binding region 1533 1620 - -
Gma10g00397 1747 Coils Coil 320 340 - -
Gma10g00397 1747 Pfam CLASP N terminal 1113 1307 IPR024395 -
Gma10g00397 1747 Pfam CLASP N terminal 596 811 IPR024395 -
Gma10g00397 1747 Gene3D - 312 530 IPR011989 -
Gma10g00397 1747 Gene3D - 1530 1741 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00397 Gma-Chr10 3815431 3845418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00397 32 300 Acyl Lipid Metabolism Gene Families AT4G10950 32.593 4.52e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00397 K16578 - gmx:100775793 2773.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00397 10 3815431 3845418 Gma10g00397 10 3815431 3845418 ECH
Gma10g00397 10 3815431 3845418 Gma13g01102 13 25177447 25201845 GST
Gma19g01620 19 45642692 45656762 Gma10g00397 10 3815431 3845418 PCT
Gma03g01567 03 41956061 41972446 Gma10g00397 10 3815431 3845418 PCT
Gma10g00397 10 3815431 3845418 Gma19g01620 19 45642692 45656762 PCT
Gma10g00397 10 3815431 3845418 Gma03g01567 03 41956061 41972446 PCT