Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01102 ATGTCAAGAACAAGAGTGGTCCTCATGACCCTCACCCTGGTGGTGGTGACAGTTCTGAACAACACAGAGAGTGCAGAAAGTGCTCGCACTTTCTATGTGTTCGGGGACTCTCTAGTTGACAGTGGCAACAACAATTACTTGCCAACCACAGCACGCGCTGACTCTCCTCCTTACGGCATCGACTATCCCACCGGTCGCCCCACTGGTCGCTTCTCCAATGGCTACAACCTCCCTGACCTTATCAGCCAGCATATTGGGTCTGAACCCACGTTACCATACTTGAGCCCTGAACTCACCGGACAAAAGCTATTAGTTGGGGCCAATTTCGCTTCCGCGGGGATAGGAATCCTTAACGACACTGGCATCCAATTTGTGGGGATCTTAAGAATGTTCGAGCAGTATGCGCTGTTCGAGCAGTACCAGCAACGATTAAGTGCATTAGTGGGAGCAGCGCAGGCTCAGCGAATCGTGAATGGGgcactgttcctcatgacacttggtggtaacgatttcgttaacaactactttctcactcctgtgtctgccaggtctcgccaattcactgtccctcagtactgtcgttaccttatctccgagtatcgtaaaattctcatgaggttgtatgagttgggagctagaagggttcttgtgaccggaactgATCTGCACCCGGCCGCGCCAGATCCGatggaggaagcgctcgagctcgcgcgcgcaaaggacgcgaaggagcgcatggcgggcgtggagcgcctacacgaggttctggaagcttccagaaggagcctCAGCTCCGGCGAGGTCACCTCGCTCGTCGATTGCTGCTTGGATCTCTTGAAGGACAGCAGCTTCAAGGTCTCGCAGGGCGCGCTCCAGGCGCTCGACTCCGCCGCCGTGCGCGCCGGCGACCACTTCAAGCTCCACTTCAACGCGCTCGTCCCCGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCGAGGCGGCTCCTTCTCACTCTCATGGAGGTTTCATCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCATGGACAAGCAAAAGCTGGAGAGTCAGAGAGGAATTTGCGCGAACAGTCACATCTGCAATTGGTCTATTTTCATCTACTGAGCTTCCCCTTCAACGTGCTATTCTTCCTCCTATTTTGCAGTTGCTGAATGATCTGAATCCTGCTGTTAGGGAAACAGCTATTTTGTGTATTGAGGAAATGTATACACAAGCTGGGTCCCAATTTCGTGATGAACTTCAGCGCCACAATCTCCCTTCATCTTTGGTGAAAGCTATTAATGCCAGGCTAGAGGGAATTCAACCAAAAGTTCACTCTTCAGATGGTATTTCTAGTGGTTATAATGCTGGGGAAATTAAGCCTGTGGGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACCTCTCTTTTTGGAGGAGAAGGTGATGCCACTGAGAAAGTCATAGACCCCATCAAGGTGTATTCAGAGAAGGAGTTAATCAGAGAAATTGATAAGATTGCTTCTACTCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCCATGCAAAGAATTGAAAGTCTTGTTTTGGGAGGTGCTGCTGATTATCCATGTTTCTTTGGACTCCTGAAGCAGCTTGTTGGACCTTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTGAAGCAGGCTTGCCATTTATTATGCTTTTTGTCGAAGGACTTTTTGGGTGATTTTGAAGCATGTGCTGAATTGTTGATACCGGTCCTTCTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCGGAATCTGCAGATAACTGCATAAAAACGATGTTGCGCAACTGCAAAGCAGCTCGTGTACTTCCTCGGATAGCTGATTGTGCCAAAAATGATCGTAATGCTGTTCTTCGTGCAAGGTGTTGTGATTATGCTCTTTTGATACTAGAACATTGGCCTGATGCAGCAGAAGTACAACGATCGGCTGATCTATATGAGGATATGATAAGGTGTTGTGTTTCAGACGCAATGAGTGAGGTGCGGTCGACTGCAAGGATGTGTTACAGAATGTTTGCAAAGACTTGGCCAGAACGTTCCCGTCGCCTGTTTTCATCATTTGACCCTGCTATTCAAAGGTTAATAAACGAAGAGGATGGAGGAATGCATAGGCGACATGCATCACCGTCTGTTCGTGATAGAGGTGCACTGATGCCAATAACTAGTCAAGCTTCAGCACCCTCTAATTTAACTGGTTATGGAACTTCTGCTATTATTGCAATGGACCGAAGTTCAAGTTTATCATCGGGGACTTCTATCGCCTCTGGTGTTCTTTCACAAGCCAAGTCACTTGGTAAAGTTACTGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGGGGTTTGGATTTGTCTGATAAGCATGGTTCATCTGCTCTCCGGTCATCGAGCTTGGGTCTAGGAGTTGACCCTCCCTCATCTCGTGATCCACCATTCCCTGCTGCTGTCACAGCATCTAATCATCTGACTAGCTCTTTAACGGCAGAATCAACTGCAGCTGGTGCCAATAAAGCTAGTAACCGACATGGTGGTTTGGGTTTGTCTGACATAATCACCCAAATTCAAGCTTCCAAAGATTCTGGCAGGTTATCGTATAATACTAATGTTGGTATTGAGCCTTTATCAGCATTCTCATCATTCTCAAGTAAAAGGGCTACTGAAAAATTGCAAGAAAGAGGTTCTATTGATGAAAACAGTGATATGAGGGAGACTAGACGCTATATGAACCCCAACATAGATAGGCAGTATATGGATACCCATTATAGAGATGGCAACTATAGGGATTCACAGAATAGTTATGTGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGTAGCTGGACGTGTGTCTGCTGGAAGCAGGAGGAGTTTTGATGATAGCCAATTATCTCTTGGAGAGATGTCAAATTATGCAGATGGCCCAGCATCTCTTCATGAAGCTCTGAGTGAAGGACTTAGCTCAGGTTCTGACTGGTCCGCTAGGGTTGCTGCCTTTAATTATCTTCACTCTTTGTTTGAGCAAGGTCAAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAAAAGGTAATGAAGTTGTTTTTTCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTCTCCACACTTGCAGATATTATTCTGGCATGCCGAAAGCCCTTTGAAGGTTACATGGAACGAATGTTACCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTAGTTAGACAAGCATGCTCAATGAATTTGGAAGTTGTTAGCAAAACATACAGCATAGATTCTCTCCTACCTGCATTGCTACGATCTCTAGATGAACAAAGGTCACCAAAGGCAAAATTGGCTGTTATTGAGTTTGCAATAAGTTCATTTGATAAGCATGCCATGAATCCTGAAGGTACTGCTAATATTGGCATCCTAAAATTATGGCTTGCCAAGCTAGTCCCATTGGTTCATGATAAAAATACAAAACTTAAAGAAGCAGCTATTACATGCATTATATCGGTGTACTCTCACTTTGATTCATCTGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGATGAACAAAATTCTTTGAGGCGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGACTTAATGAATTATCTGCAAAATAAGAAAGATCGCCGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAGCATCCTCTGAAGAGGGATATGCTGGTTTGTCAAGGAAAGCTCAGTACATTGGAAGGTATTCTGCTGGTTCACTAGATAGTGATGGTGGCAGGAATTGGAGTTCCCAAGATTCCACCCTGATTAAAGCCAGTCTTGGCCAAGCAGCTACTGATGAAACTGAAGAACATACTGATTCTAATAGTGGTGCTTTTGGTTTAAAAACTAAAGAGCTTGCTTACACAGCCAATTCAACGGGTCAAAACTTTGGCTTACAAACTAGCCATGGACATGTGGACAGTAGCATTAATTTTGAAGGTCTATCATCTGATCTGAATGTTAATGGTCTGATGTCATCAGAACATTTAAATATTACTGAAGACTTTGGACATGACAAAGAACATCATTCAGCTGAAGATGTGAAAGTAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTTCAACAGCTAGCTGAAGTGTCTATAGCCAATGATCATTCTGTTTGGACCCTGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTGCTCTGTCTCTGATAGTTGAAATGCTGAAAAACCAGAAAGATGCTATGGAAAATTCAGTTGAGATTGTAGTTGAAAAGCTGCTTAATGTTACCAAGGATATTGTTCCCAAGGTTTCAAATGAAGCAGAGCACTGCCTCACCATTGTTTTATCTCAGAATGATCCGTTCAGATGCTTGAGTGTTATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACTCTTATCACTTGCATAAATTGCTTGACAAAGCTTGTGGGGAGGCTCCCTCAGGAGGAACTGATGGCTCAGTTACCCTCTTTCCTGCCTGCTTTGTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACCGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTTTTGCCATATTTGGAAGGACTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGTATCTCACAGGCAAGGACAGGAAAATCAATTGATACCACACACGATTAG 4974 0.4186 MSRTRVVLMTLTLVVVTVLNNTESAESARTFYVFGDSLVDSGNNNYLPTTARADSPPYGIDYPTGRPTGRFSNGYNLPDLISQHIGSEPTLPYLSPELTGQKLLVGANFASAGIGILNDTGIQFVGILRMFEQYALFEQYQQRLSALVGAAQAQRIVNGALFLMTLGGNDFVNNYFLTPVSARSRQFTVPQYCRYLISEYRKILMRLYELGARRVLVTGTDLHPAAPDPMEEALELARAKDAKERMAGVERLHEVLEASRRSLSSGEVTSLVDCCLDLLKDSSFKVSQGALQALDSAAVRAGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTSKSWRVREEFARTVTSAIGLFSSTELPLQRAILPPILQLLNDLNPAVRETAILCIEEMYTQAGSQFRDELQRHNLPSSLVKAINARLEGIQPKVHSSDGISSGYNAGEIKPVGVNPKKSSPKAKSSSRETSLFGGEGDATEKVIDPIKVYSEKELIREIDKIASTLVPEKDWSIRIAAMQRIESLVLGGAADYPCFFGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKDFLGDFEACAELLIPVLLKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIADCAKNDRNAVLRARCCDYALLILEHWPDAAEVQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGMHRRHASPSVRDRGALMPITSQASAPSNLTGYGTSAIIAMDRSSSLSSGTSIASGVLSQAKSLGKVTERSLESVLHASKQKVTAIESMLRGLDLSDKHGSSALRSSSLGLGVDPPSSRDPPFPAAVTASNHLTSSLTAESTAAGANKASNRHGGLGLSDIITQIQASKDSGRLSYNTNVGIEPLSAFSSFSSKRATEKLQERGSIDENSDMRETRRYMNPNIDRQYMDTHYRDGNYRDSQNSYVPNFQRPLLRKNVAGRVSAGSRRSFDDSQLSLGEMSNYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLFEQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIILACRKPFEGYMERMLPHVFSRLIDPKELVRQACSMNLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFDKHAMNPEGTANIGILKLWLAKLVPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKDRRSKSSYDPSDVVGASSEEGYAGLSRKAQYIGRYSAGSLDSDGGRNWSSQDSTLIKASLGQAATDETEEHTDSNSGAFGLKTKELAYTANSTGQNFGLQTSHGHVDSSINFEGLSSDLNVNGLMSSEHLNITEDFGHDKEHHSAEDVKVNYMTDNGPSIPQILHMICSGGDGSPISSKRTALQQLAEVSIANDHSVWTLYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMENSVEIVVEKLLNVTKDIVPKVSNEAEHCLTIVLSQNDPFRCLSVIVPLLVTEDEKTLITCINCLTKLVGRLPQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTGKSIDTTHD 1657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01102 1657 Coils Coil 1493 1513 - -
Gma13g01102 1657 Gene3D SGNH hydrolase 17 228 IPR036514 -
Gma13g01102 1657 Gene3D - 1025 1249 IPR011989 -
Gma13g01102 1657 Gene3D - 495 736 IPR011989 -
Gma13g01102 1657 Coils Coil 239 259 - -
Gma13g01102 1657 Gene3D - 1440 1650 IPR011989 -
Gma13g01102 1657 Gene3D - 229 452 IPR011989 -
Gma13g01102 1657 MobiDBLite consensus disorder prediction 451 493 - -
Gma13g01102 1657 SUPERFAMILY ARM repeat 517 1647 IPR016024 -
Gma13g01102 1657 Pfam HEAT repeat 389 416 IPR000357 GO:0005515
Gma13g01102 1657 MobiDBLite consensus disorder prediction 838 861 - -
Gma13g01102 1657 SMART TOG_3 1415 1649 IPR034085 -
Gma13g01102 1657 SMART TOG_3 511 743 IPR034085 -
Gma13g01102 1657 SMART TOG_3 1009 1257 IPR034085 -
Gma13g01102 1657 SMART TOG_3 221 453 IPR034085 -
Gma13g01102 1657 ProSiteProfiles HEAT repeat profile. 312 350 IPR021133 -
Gma13g01102 1657 PANTHER PROTEIN, PUTATIVE-RELATED 256 1649 - -
Gma13g01102 1657 Pfam Vacuolar 14 Fab1-binding region 1443 1530 - -
Gma13g01102 1657 MobiDBLite consensus disorder prediction 476 490 - -
Gma13g01102 1657 ProSiteProfiles HEAT repeat profile. 389 427 IPR021133 -
Gma13g01102 1657 Pfam CLASP N terminal 514 729 IPR024395 -
Gma13g01102 1657 Pfam CLASP N terminal 1031 1225 IPR024395 -
Gma13g01102 1657 Pfam GDSL-like Lipase/Acylhydrolase 32 262 IPR001087 GO:0016788
Gma13g01102 1657 PANTHER CLASP 256 1649 - -
Gma13g01102 1657 SUPERFAMILY ARM repeat 226 631 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01102 Gma-Chr13 25177447 25201845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01102 32 227 Acyl Lipid Metabolism Gene Families AT4G10950 34.673 1.97e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01102 K16578 - gmx:100801377 2749.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00397 10 3815431 3845418 Gma13g01102 13 25177447 25201845 GST
Gma19g01620 19 45642692 45656762 Gma13g01102 13 25177447 25201845 PCT
Gma03g01567 03 41956061 41972446 Gma13g01102 13 25177447 25201845 PCT
Gma13g01102 13 25177447 25201845 Gma19g01620 19 45642692 45656762 PCT
Gma13g01102 13 25177447 25201845 Gma03g01567 03 41956061 41972446 PCT