Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01545 ATGTTTAGCAGGCAAAGGGGTGCCAGTGCTTTTAGTATATTCAAATGGAAACATCCAGGTGCATCATCTCTGACAACAGCTTTACTTCAGGAAGACCTGCCGGAGATTGAATTGTCTGATTATGGAAAGATCCCTAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTGAATGGTGAGAGCCTAAATGTAGAGCCAATTAGTGATTTGGATCTCTTCTCTGAAAGGCTTTACAGCTACTATTGTGAGAAAGGGCTATGGTGCATCGTTATAAAGTGGATTGTTGAACTTCTTAGTCTGGGGTTCACCATATGTTTTTCAGGATTTTTTTTACTATATGTTGATTGGAATGGGCTCCGTAATGCTAAGTGTGGGATGGATGCAGTTGAATCTGGAATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCTTTAACCCCACTAACACTTACCAAATCTATTATTGTTGGATACTTGGGAATATTTTCCATCTATTTGATTTTTTGCTTCTTGAGATTCTTTGCTCAACTAAAGGATACTCTGGAAATCCGGCATTTTTACTACAACAATCTCCATGTTACCGACAATGAAATCCAAACCATGCCCTGGGCTACAattcttgaaaaagttgttctggtacaaaggtctcgtcaactttgtgtggtaaaagatctttctgcccatgacattgtcatgcggttgatgaggaaggagaactacttaattggaatgctcaacaagggtgtactagctttccctatttcacagTGGTTTCCAGGTGCTGGTCCTACAGTGAATTCTAGTTCTAATGGAACACAGAATCGTGTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAGAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCAAAGACATTACGAAAAAGGCTAATGGTAGTTGGGCTTGCAATGCTTTTAGTCTCTCCATTTCTAGTCATATTCATGCTGGTATATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCACCCTAGCACGGCATCATCTCAAAGATGGTCAAATTTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCACCGGATTAATTGTGGTGTATTGCATGCTTCTGATTATCTCAAGCAGTTTCCTTCACCTATCATATCTATCATTGCAAAATTCATATCTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTCGAGGAGTCTCTACTAGAGGGCCATGTATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCCATTACCAATGAGGTTCTAGTCTTAGACGCTGATGGAGCAATGTCTATGGTGGTCCAACATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAAATGGTCCATGTTGAGTTTGAAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATACTTACTTTTGTGTATTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTCATTGCTGATTTCACTGTAAATGTTGAAGGTGTTGGCCATGTTTGCAGTTTTAGTGCCTTTGATTTTCAAGAGCATGGAAACAGTCATTATGGTTCCCCTTGCAATGCACCTCGTAGCCGGAGGAGTTCCCAAGGGAAGATGGAGAAATCATTGCTGAGCTTTCAGAGTAGTTACCCATCATGGGAACCAAGTGCTCTGGGGAAGCGGTTTTTGCTAAATCTTAGAAGATTTAGAGAGGAAACGTTACCTGTACATGGAAACGTACATGCACCTTCCCCTCCTAGAATGTGGAGGGGTAGTCCCAATATTGGAGACAGATACAGGTTTATATCCAGGGAAATGCTATACAGTACTCGTGACAATCACTTGGGTTCTTTGTGGTTGGTTGAAGCTAACCAAAACAATCATCCTTATCTTCTTGATTGGTACTATACATCCCGATCTCATGACACAAATCCAGGAGACGTTCCTTTAGAAGAACCATTTGGATCTCATGATGTGAATCTGGGAGATGTGCATTTAGAACCATTTGGAGTAATAAAGCATAGTTCTAGAGAGTTTTTGATGGCCCCCTCCAACTTGACACAGAATGAAAGTGGGTATGAGGAATACTCAGACGAGTTTCATGATGGTTGGGCTGCATCACATCTTGGAACTTCCACTTCAGCTCCCATCTTCAGGAAAAGCGTGATCCACAATCAAAGTTATAATGAACTGTCCCATACTACCAGCAGTCATTGGTGGGCTAGAAGTGATCCACGGGGTGGACAGACTCAGACAAGCATTTTTGAGCCTCCAGCTTTCAACCACCAAACATATGATTATCATGATAAGTTTTCTGATAGAGAATCAGAGGATCAAGATCATGAACAAAGCATGTATTCTAGAGATGATCACAGATTATCTAGAACATACACAGATGACTTAGGGGCAGGGGAATTTAATCTTCATTTTGATGATATTTACAGCAGACCTCCAGAAACTCCACCTGCAAGCTTTTGA 2610 0.3912 MFSRQRGASAFSIFKWKHPGASSLTTALLQEDLPEIELSDYGKIPSPGSESPSGLLNGESLNVEPISDLDLFSERLYSYYCEKGLWCIVIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTLTKSIIVGYLGIFSIYLIFCFLRFFAQLKDTLEIRHFYYNNLHVTDNEIQTMPWATILEKVVLVQRSRQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPTVNSSSNGTQNRVILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAMLLVSPFLVIFMLVYLFLRHAEQFYNHPSTASSQRWSNLSRWIFREFNEVDHLFKHRINCGVLHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHVFGRNLFWYAAVFGTITAISRAAITNEVLVLDADGAMSMVVQHTHYMPKRWRGKESTEMVHVEFETLFQYTGMMLLEEMASIFLTPYLLLCIVPKRVDDILQFIADFTVNVEGVGHVCSFSAFDFQEHGNSHYGSPCNAPRSRRSSQGKMEKSLLSFQSSYPSWEPSALGKRFLLNLRRFREETLPVHGNVHAPSPPRMWRGSPNIGDRYRFISREMLYSTRDNHLGSLWLVEANQNNHPYLLDWYYTSRSHDTNPGDVPLEEPFGSHDVNLGDVHLEPFGVIKHSSREFLMAPSNLTQNESGYEEYSDEFHDGWAASHLGTSTSAPIFRKSVIHNQSYNELSHTTSSHWWARSDPRGGQTQTSIFEPPAFNHQTYDYHDKFSDRESEDQDHEQSMYSRDDHRLSRTYTDDLGAGEFNLHFDDIYSRPPETPPASF 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01545 869 MobiDBLite consensus disorder prediction 816 837 - -
Gma19g01545 869 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 869 - -
Gma19g01545 869 MobiDBLite consensus disorder prediction 780 803 - -
Gma19g01545 869 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Gma19g01545 869 PANTHER APG9 AUTOPHAGY 9 1 869 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01545 Gma-Chr19 44822635 44829981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01545 K17907 - gmx:732654 1738.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01545 19 44822635 44829981 Gma19g01545 19 44822635 44829981 ECH
Gma19g01545 19 44822635 44829981 Gma03g01491 03 41154713 41161896 GST
Gma19g01545 19 44822635 44829981 Gma10g00336 10 3165743 3173074 PCT
Gma19g01545 19 44822635 44829981 Gma13g01021 13 24336575 24342414 PCT
Gma10g00336 10 3165743 3173074 Gma19g01545 19 44822635 44829981 PCT
Gma13g01021 13 24336575 24342414 Gma19g01545 19 44822635 44829981 PCT