Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01491 ATGTTTAGCAGGCAAAGGGGTGCCAGTGCTTTTAGTATATTCAAATGGAAACATCCAGGTGCGTCATCTCTGACAGCAGGTTTACTTCAGGAAGATCCGCCGGAGATTGAATTGTCTTATTATGGAAAGATCCCCAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTTAATGGTGAAAGCCTAAATGTAGAACCAATTGCCGATTTGGATCTCTTCTTTGAAAGGCTTTACAGCTACTATTGCGAGAAAGGGCTATGGTGCATCATTATAAAGTGGATTGTTGAACTTCTAAGTCTAGGGTTCACCATATGTTTTTCAGGGTTTTTTTTACTATATGTTGATTGGAATGGGCTCCGTAATGCTAAGTGTGGGATGGATGCGGTTGAATCTGGAATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCTTTAACCCCACTAACACTTACCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCCATCTATTGGATTTTTTGCTTCTTGAGATTCTTTGCTCAACTAAAGGATACTCTGGAAATCCGGCATTTTTACTACAACAGTCTCAATGTTACCGACAATGAAATCCAAACCATGCCCTGGACTACAattcttgaaaaagttgttctggtacaagggtctcgacaactttgtgtggtaaaagatctttctgcccatgacattatcatgcggttgatgcggaaggagaactacttaatcggaatgctcaacaagggtgtgctagctttccctatttcacagTGGTTTCCAGGTGCTGGTCCTACAGGGAAATCTAGTTCTAATGGAACACAGAATCGTGTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAGAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCAAAGACATTACGAAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTCTCTCCATTTCTTGTAATATTTATGCTGGTATATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCATCCTAGCACGGCATCATCTCGAAGATGGTCTAATTTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTTTTCAAGCACCGGATTAATAGCAGTGTATTGCATGCTTCTGATTATCTCAAGCAGTTTCCTTCACCTATCATATCTATCATTGCAAAATTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTCGAGGAGTCTCTACTAGAGGGCCATATATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCCATTACCAGTGAGGTTCTGGTCTTAGACGCTGATGGAGCAATGTCTATGGTGGTCCAACATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAAATGGTTCGTGTTGAGTTTGAAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATACTTACTTTTGTGTATTGTCCCAAAGCGGGTTGATGATATTTTGCAGTTCATTGCTGATTTCACTGTAAATATTGAAGGTGTTGGCCATGTTTGCAGTTTTAGTGCCTTCAATTTTCAAGAGCATGGAAACAGTCGTTATGGTTCCCCATGCAATGCACCTCGTAGCCAGAGGAGTTCCCAAGGGAAGATGGAGAAATCATTGCTGAGCTTTCAGAGTAGTTACCCATCATGGGAACCAAGTGCACAGGGGAAGCGCTTTTTTCTAAATCTTAGAAGATTCAGAGAGGAAAAGTTATCTGTACATGGAAACATACATACACCTTCCCATCCTAGAATGTGGAGGGGTAGTCCCAATATGGGAAGCAATAGTGGAGACAGAAACAGGTTTATATCCAGGGAAATGCCATATAGTACTTGTGACAATCACTTGGGTTCTTTGTGGTTGATTGAAGCCAACCAAAACAATCATCCTTATCTTCTTGATTGGTACTATACATCCCGATCACATGACACAAATCTGGGAGATGTTCCTTTAGAAGAACCATTTGGATCTCATGATGTGAATCTGGGAGATGTTCATTTAGAACCATTTGGAGCAATAGAGCATCGTTCTAGAGAGTATTTGATGCTCTCCAACTTGACACAGAATGAAAGTGGGTATGAGGAATACTCAAACGAGTTTCAGGATGGTCGGGCTGCATCACATCTTGGAACTTCCATTTCAGTTCCCATCTTCAGGGAAAGCATGATTCATGATCAAAGTTGTAATGAACTGTCCCATACTAGCAGGAGTCATTGGTGGGCTAGAAGTGATCCACGGGGTGGACAGACTCAGACAAGCTTTTTTGAGCCTCCAGCTTTCAACCTCCAAACATATGATTATCATGATAAGTTTTCTGATAGAGGGTCAGAAGATCAAGATCAAGAACAACGCATGTACTCTAGAGATGATCACAGATTATCTAGAACATACACAGATGACTTAGGGGCAGGGGAATTTAATCTTCATTTTGATGATATTTACAGCAGACCTCCAGAAACTCCCCCTGCAAGCTTTTGA 2619 0.3898 MFSRQRGASAFSIFKWKHPGASSLTAGLLQEDPPEIELSYYGKIPSPGSESPSGLLNGESLNVEPIADLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTLTKAIIVGYLGIFSIYWIFCFLRFFAQLKDTLEIRHFYYNSLNVTDNEIQTMPWTTILEKVVLVQGSRQLCVVKDLSAHDIIMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPTGKSSSNGTQNRVILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINSSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITSEVLVLDADGAMSMVVQHTHYMPKRWRGKESTEMVRVEFETLFQYTGMMLLEEMASIFLTPYLLLCIVPKRVDDILQFIADFTVNIEGVGHVCSFSAFNFQEHGNSRYGSPCNAPRSQRSSQGKMEKSLLSFQSSYPSWEPSAQGKRFFLNLRRFREEKLSVHGNIHTPSHPRMWRGSPNMGSNSGDRNRFISREMPYSTCDNHLGSLWLIEANQNNHPYLLDWYYTSRSHDTNLGDVPLEEPFGSHDVNLGDVHLEPFGAIEHRSREYLMLSNLTQNESGYEEYSNEFQDGRAASHLGTSISVPIFRESMIHDQSCNELSHTSRSHWWARSDPRGGQTQTSFFEPPAFNLQTYDYHDKFSDRGSEDQDQEQRMYSRDDHRLSRTYTDDLGAGEFNLHFDDIYSRPPETPPASF 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01491 872 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Gma03g01491 872 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 872 - -
Gma03g01491 872 MobiDBLite consensus disorder prediction 819 839 - -
Gma03g01491 872 PANTHER APG9 AUTOPHAGY 9 1 872 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01491 Gma-Chr3 41154713 41161896 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01491 K17907 - gmx:100777405 1748.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01491 03 41154713 41161896 Gma03g01491 03 41154713 41161896 ECH
Gma19g01545 19 44822635 44829981 Gma03g01491 03 41154713 41161896 GST
Gma03g01491 03 41154713 41161896 Gma10g00336 10 3165743 3173074 PCT
Gma03g01491 03 41154713 41161896 Gma13g01021 13 24336575 24342414 PCT
Gma10g00336 10 3165743 3173074 Gma03g01491 03 41154713 41161896 PCT
Gma13g01021 13 24336575 24342414 Gma03g01491 03 41154713 41161896 PCT