Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01021 ATGTTTAACAGGCCAAGAGGTGCTCGTGCTTTTAATGTATTGAATTGGAAACATCAAGGTGAATCATCTGTGACAACAGGTTTACTTCAGGATGTTCCACCAGAGATTGAATTGTCGGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGCCCTTCAGACCTTCTTAATGGTGAGAGCCTAAATGTAGAGCCCATTGCTGATTTGGATTTCTTCTTCGAAAGGCTTTACTGCTACTACTGTGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATAGTTGAACTTCTGAGTCTTGGTTTCACCATATGTTTTTCGGGTTTTTTCTTACTATATGTTGACTGGAATGGGCTCCGAAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGAAGGAAGCCTTGTGATCTTGCTAAAGAAGCTCTTCATGAACACCCTTTAACCCCATTTACACTTGGCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCTATCTATTGGATATTTTGCTTCTTGAGATTCTTTGTTCAACTAAAGGATACTTTGGATATTCGACAGTTTTACTACAATGATCTCTGTGTTACTGATAATGAAATTCAAACCATGCCCTGGGCTACAATTCTTGAAAAGGTTGTTCTTGTGCAAAGCTCACGACAACTCTGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTAATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAGGGTGTGCTTTCTTTCCCAATTTCTCTGTGGGTCCCAGGTGCCGGACCTTCAGTGAAAGCTGGTACTAATCGCACACGATATCGTCTAATACTTCCCAAGACCCTTGAGTGGACTTTGAACTGGTGCATACTGCAAAGCATGTTTGATCGAAACTTCTGTGTTAGAAGAGACTTTGTGTCAAATCCAAAGACATTAAAGAAAAGGCTTATGGTAGTTGGGATTGTAATGCTTTTACTTTCTCCATTTCTTGTCATATTTATGCTGGTATATCTCTTTCTGGGGCACGCTGAACAATTTTATAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAATTTGTCACGATGGGTCTTTAGGGAATTCAATGAGGTGGATCATCTGTTCAGGCATCGGATTAATAGCAGTGTATTACATGCTACTAACTATATCAAGCAATTTCCTTCGCCTATCATATCTATCATTGCAAAATTCATCTCATTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTAGAGGAGTCTCTGCTGGAGGGTCATATATTTGGTCGGAACTTGTTCTGGTATGCTGCTGTTTTTGGAACTATAACTGCTATTAGACGGGCTTCAATTACAGATGAGCTTCTAGTCATAGACCCCGAAGGAGCAATGTCAATGGTAGTTGAGCATACACATTATATGCCCAAGAGATGGCGGGGAAAAGAAAGTACTGAAATGGTCCGGATTGAGTTTGAAACCTTATTCCAGTATAGTGGGATGATGTTACTTGAGGAGATGGCCTCGATTTTCCTTACTCCATACTTACTTCTGTTGGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTTATTGCAGATTTTACTGTAGATGTTGAAGGTGTTGGTCATGTTTGCAGTTTTAGTGTCTTCAATTTTCAAGAGCATGGAAACAGTAATTATGGCTCTCCATTTAATGCACCTCACAGCCAGAGAAGTTCCCAGGGGAAGTTGGAGAAATCATTTTTGAGCTTTCAGAGTAGTTACCCTTCATGGGAACCAAATGCTCAAGGGAAGCAGTTTCTGCAAAATCTGAGAACATTCAGAGACCAAAACTTAGCAGGACACGTAAGCCGACATGAATTTCCCCCTCTTAGACTGTGGAGAGGCAGTCCAAACATGGGAAGCAATGGAGACAGAAACAGGTTTGCATCCAGGGAAATGCCATTTAGTACTTTTGCAACTGGCAATCATTTGGGTTCATTGTGGCTAATTGAATCAAGAAATCAAAACAATCATCCCTATCTTCTTGATTGGTACTACACTTCCCAACCTCATGATGCAACAACTCAAAGACATATTCAAGCTGATGATCCATTTGAAGTAACGGAGCATCAATCCCCAGATTGGATGCCCTCCATCTTGGTACAAAATGAGCAACATGGGCATGAAGAATACATAAATGAGTATTGCGATGAACGTGTCACTTCCCATCTTGGCGCTTCCACATCAGCTCCCATCTTCAGGGAAAGCCTAATTCAGGATCAACATTCCATTGATATGCCCCTCACTACCAGGAGTCATTGGTGGGCTAGAAGTCACTCCCAGAGTGGACATGGTCAGACAAGCTTTTTTGAGCCACCAGATTTCAATCACCAACCAGTATACAATTACCATGAAAAGTTTTCTGATAGAGGGTCAGAGGATCATGATCAGGAACAACACTTGCACTGGGGAGATTATCACCAAGTAGTATCTAGTACAGCACATGTAGATGATTTAGATGCAGGAAAATTCAATCTTCTATTTGATGATGTTTATAGCAGTACTCCACAAAATTCCACTGTAAATCCTAGCACTGCAACCTTTTAA 2607 0.412 MFNRPRGARAFNVLNWKHQGESSVTTGLLQDVPPEIELSDYRRIPSPGSESPSDLLNGESLNVEPIADLDFFFERLYCYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGRKPCDLAKEALHEHPLTPFTLGKAIIVGYLGIFSIYWIFCFLRFFVQLKDTLDIRQFYYNDLCVTDNEIQTMPWATILEKVVLVQSSRQLCVVKDLSAHDMVMRLMRKENYLIGMLNKGVLSFPISLWVPGAGPSVKAGTNRTRYRLILPKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLKKRLMVVGIVMLLLSPFLVIFMLVYLFLGHAEQFYNHPSTASSRRWSNLSRWVFREFNEVDHLFRHRINSSVLHATNYIKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAIRRASITDELLVIDPEGAMSMVVEHTHYMPKRWRGKESTEMVRIEFETLFQYSGMMLLEEMASIFLTPYLLLLVVPKRVDDILQFIADFTVDVEGVGHVCSFSVFNFQEHGNSNYGSPFNAPHSQRSSQGKLEKSFLSFQSSYPSWEPNAQGKQFLQNLRTFRDQNLAGHVSRHEFPPLRLWRGSPNMGSNGDRNRFASREMPFSTFATGNHLGSLWLIESRNQNNHPYLLDWYYTSQPHDATTQRHIQADDPFEVTEHQSPDWMPSILVQNEQHGHEEYINEYCDERVTSHLGASTSAPIFRESLIQDQHSIDMPLTTRSHWWARSHSQSGHGQTSFFEPPDFNHQPVYNYHEKFSDRGSEDHDQEQHLHWGDYHQVVSSTAHVDDLDAGKFNLLFDDVYSSTPQNSTVNPSTATF 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01021 868 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 859 - -
Gma13g01021 868 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Gma13g01021 868 PANTHER APG9 AUTOPHAGY 9 1 859 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01021 Gma-Chr13 24336575 24342414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01021 K17907 - gmx:100809347 1782.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00336 10 3165743 3173074 Gma13g01021 13 24336575 24342414 GST
Gma19g01545 19 44822635 44829981 Gma13g01021 13 24336575 24342414 PCT
Gma03g01491 03 41154713 41161896 Gma13g01021 13 24336575 24342414 PCT
Gma13g01021 13 24336575 24342414 Gma19g01545 19 44822635 44829981 PCT
Gma13g01021 13 24336575 24342414 Gma03g01491 03 41154713 41161896 PCT