Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00336 ATGTTTAACAAGCCAAGAGGTGCTAGTGCTTTTAATGTATTGAATTGGAGACGTCAAGGTGAATCATCTGTGACAACAGGTTTACTTCAGGATGTTCCACCAGAGATTGAATTGTCGGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGCCCTTCAGACCTACTTAATGGTGAGAGCCTAAATGTAGAACCCATTGCTGATTTGGATTTCTTCTTCGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATAGTTGAACTTCTGAGTCTTGGTTTCACCATATGTTTTTCGGGTTTTTTCTTACTATATGTTGACTGGAATGGGCTCCGAAATGCAAAGTGTGGGATGAATGCAGTTGAATCTGGAAGGAAGCCTTGTGATCTTGCTAAAGAAGCTCTTCATGAGCACCCTTTAACCCCATTTACACTTAGCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCTATCTATTGGATATTTTGCTTCTTGAGATTCTTTGTTCAACTAAAGGATACTTTGGATATCCGACAGTTTTACTACAATAATCTCCGTGTTACTGATAATGATATTCAAACCATGCCCTGGGCTACAATTCTTGAAAAGGTTGTTCTTGTGCAAAGCTCACGACAACTCTGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTAATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAGGGTGTGCTTTCTTTCCCCATTTCTCAGTGGGTCCCAGGTGCTGGACCTACAGTGAAATCTGGTACTAATGGCACACAATATCGTCTAATGCTTCCCAAGACCCTTGAGTGGACTTTGAACTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTCTGTGTCAGAAGAGATTTTGTGTCAAATCCAAAGACATTAAAGAAAAGGCTTATGATAGTTGGGATTGTAATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGAGGCACGCTGAACAATTTTATAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAATTTGTCACGATGGGTCTTTAGGGAATTCAATGAGGTGGATCATCTCTTCAGGCACCGGATTAATAGCAGTGTATTACATGCTTCTAACTATATCAAGCAATTTCCTTCACCTATCATATCTATCATTTCAAAATTCATATCATTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTATAGAGGAGTCTCTGCTGGAGGGTCATATATTTGGTCGGAACTTGTTCTGGTATGCTGCTGTTTTTGGAACTATAACTGCTATTAGACGGGCTGCAATTGCAGATGAGCTTCTAGTCATAGACCCCGAAGGAGCAATGTCAATGGTAGTTGAGCATACGCATTATATGCCCAAGAGATGGCGGGGCAAAGAAAGTACTGAAATGGTCCGGATTGAGTTTGAAACCTTATTCCAGTATAGTGGGATGATGTTACTTGAGGAGATGGCCTCGATTTTCCTTACTCCATACTTACTTCTGTTGGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTTATTGCAGATTTTACTGTAGATGTTGAAGGTGTTGGTCATGTTTGCAGTTATAGTGTCTTCAATTTTCAAGAGCATGGAAACAGTAATTATGGTTCTCCGTTTAATGCACCTCGCAGCCAGAGAAGTTCCCAGGGGAAGTTGGAGAAATCATTTTTGAGCTTTCAGAGTAGTTACCCTTCATGGGAACCAAATGCTCAAGGGAGGCAGTTTCTGCATAATCTGAGAACATTCAGAGACCAAAACTTAGCAGGACACATAAACCAACATGGATTTTCCCCTCCTAGACTGTGGAGAGGCAGTCCCAACATGGGAAGCAATGGAGACAGAAACAGGTTTACATCCAGGGAAATGCCATATAGTACTTTTGCAACTGGCAATCATTTGGGTTCTTTGTGGCTAATTGAATCCAGAAATCAAAACAATCATCCCTATCTTCTTGATTGGTACTACACTTCCCAACCTCATGATACAGCTCAAAGACATGTTCAAGCTGATGATCCATTTGAAGTAACGGAGCATCAATTCCCAGATTGGATGCCCTCTATCTTGGTACAAAATGAGCAACACGGGCATGAAGGATACATAAACGAGTATTGTGATGAACGCGCTGCTTCCCATCTCGAGGCTTCCACATCAGCTCCCATCTTCAGGGAAAGCCTAAGTCAGGATCAACATTCCATTGATATGCCCCTCACTACCAGGAGTCGTTGGTGGGCAAGAAGTGATCCCCAGAGTGGACAAGGTCAGACAAGCTTTTTTGAGCCACCAGATTTCAATCACCAACCAGTATACAATTACCATGATAATAGAGGGTCAGAGGATCAAGATCAGGAACAACACTTGTACTGGGGAGATTATCACAAATTATCTAGTACAGCACATGCAGATGATTTATATGCAGGAGAATTCAATCTTCTTTTTGATGATGTTTATAGCAATCCTCCAGAAAATCCCACTGTAAATCCTAGCACTGCAACCTTTTAA 2592 0.414 MFNKPRGASAFNVLNWRRQGESSVTTGLLQDVPPEIELSDYRRIPSPGSESPSDLLNGESLNVEPIADLDFFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMNAVESGRKPCDLAKEALHEHPLTPFTLSKAIIVGYLGIFSIYWIFCFLRFFVQLKDTLDIRQFYYNNLRVTDNDIQTMPWATILEKVVLVQSSRQLCVVKDLSAHDMVMRLMRKENYLIGMLNKGVLSFPISQWVPGAGPTVKSGTNGTQYRLMLPKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLKKRLMIVGIVMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWVFREFNEVDHLFRHRINSSVLHASNYIKQFPSPIISIISKFISFVSGGFAAILIIIAFIEESLLEGHIFGRNLFWYAAVFGTITAIRRAAIADELLVIDPEGAMSMVVEHTHYMPKRWRGKESTEMVRIEFETLFQYSGMMLLEEMASIFLTPYLLLLVVPKRVDDILQFIADFTVDVEGVGHVCSYSVFNFQEHGNSNYGSPFNAPRSQRSSQGKLEKSFLSFQSSYPSWEPNAQGRQFLHNLRTFRDQNLAGHINQHGFSPPRLWRGSPNMGSNGDRNRFTSREMPYSTFATGNHLGSLWLIESRNQNNHPYLLDWYYTSQPHDTAQRHVQADDPFEVTEHQFPDWMPSILVQNEQHGHEGYINEYCDERAASHLEASTSAPIFRESLSQDQHSIDMPLTTRSRWWARSDPQSGQGQTSFFEPPDFNHQPVYNYHDNRGSEDQDQEQHLYWGDYHKLSSTAHADDLYAGEFNLLFDDVYSNPPENPTVNPSTATF 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00336 863 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Gma10g00336 863 MobiDBLite consensus disorder prediction 775 794 - -
Gma10g00336 863 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 855 - -
Gma10g00336 863 PANTHER APG9 AUTOPHAGY 9 1 855 IPR007241 GO:0006914
Gma10g00336 863 MobiDBLite consensus disorder prediction 775 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00336 Gma-Chr10 3165743 3173074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00336 K17907 - gmx:100779344 1737.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00336 10 3165743 3173074 Gma10g00336 10 3165743 3173074 ECH
Gma10g00336 10 3165743 3173074 Gma13g01021 13 24336575 24342414 GST
Gma19g01545 19 44822635 44829981 Gma10g00336 10 3165743 3173074 PCT
Gma03g01491 03 41154713 41161896 Gma10g00336 10 3165743 3173074 PCT
Gma10g00336 10 3165743 3173074 Gma19g01545 19 44822635 44829981 PCT
Gma10g00336 10 3165743 3173074 Gma03g01491 03 41154713 41161896 PCT