Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01531 ATGGCCGAGCACGGTTTTGATGGACATGATGTAGGATATGTGCCTGAGGACCCTAATTTTCCTCAGAATCATTCTGATGAACATGATGTAGGGACTGTGATTGATAGCTCCGGATTTCCTCACCTGCTACCTGATGAAGATGATGCAGGCAATTTGATGGAGGACGCCAATTTTCCTGAAAATGATTTTGTTGGGCATGAACATGATGTTGGAGGTTTGGCTGGGGACGCGGATTCTCCACCGGAGGAGCATGTTGAGGAAGTTCATGGTGCTGGAGATGTGCCTGAGGATTTTGATTCTCTGCCGAAACAGGGATCCGAGATTGATTCGAAGGGAAATGAAATAAAAAAGTGGCCGGGATGGCCTGGAGAGAATGTCTTCAGGATGTTGGTTCCAGTGCAAAAGGTTGGCAGTATTATTGGCCGAAAGGGCGAGTTTATAAAGAAAATCACAGAAGAGACTAAGGCGCGAATTAAAATTCTTGACGGTCCACCTGGAATCTCAGAAAGAGCAGTAATGGTTTCTGCAAAAGAAGAGCCAGATTGTCCCATACCACCTGCTGTTGATGGTTTGTTAAGGGTTCATAAGCAAGTTATCAATGTTGATCGTGACCTTGCAGATAGTGCATTGGCTGCTGGGCGATCAGTTGTTACCAGGCTTCTAGTGGCGGATACTCAAGCAGGAAGCTTGATTGGGAAGCAGGGATCAACCATAAAATCCATTCAAGATGGCTCTGGTTGCACTATACGTGTTCTTGGATCAGAAAACCTGCCAATATTTGCTTTGCGAGATGATAGTATTGTTGAAATACAAGGGGAATCTGCTGGTGTTCACAAGGCAGTTGAACTTATTGCAGTTCATTTACGCAAGTTCTTGGTTGACCGCAGCATAGTAGGAGTTTTTGAAACGCAGATGCAAATGTCAGATGTTAGAGTTAACCAGAATTTGCCACCGCATCAAAATTGGGGTCCTCCTCCTCAAGGGTTTCCTGCTCCTGCTGGTGGTGGTGGTGGAGGAGGACCTGCTTTTGCACCTAATCATCAATATATGCCACCTTCACATCACTATGATAGTTATTATCCACCTACTGAGTTGCCTCCCATGGACAAACACCTTCATCAAGGTCCACCACCTGCCTATGCAAGGGATGCTTCTATGGGAATTCATTCATCAAGTGCACAACCACAACAATCTGTTGTAACTAAGGTCACACAGCACATGCAGATTCCTCTTACATATGCAGATGCTGTTATAGGAGCATCGGGCACAAATATCAGCTATATACGTCGTGCTAGTGGAGCAAGTATTACAATTCAGGAAACAAGGGGTGTGCCAGGGGAGATGACTGTTGAGATAAGTGGGACTTCTTCTCAAATACAGGCAGCCCAGCAGCTGGTTCAGAATTTCATGGCTGAAGCTGCAAGTGCGACACAGGATCCTATGGGGGGATCAGTCAGCCAAGGTTACAGTGCCTATCCAACAACTGCTCCAGTTTATGCTCCTCCACCCACTAGCGCTGGTGGTCATACAGGCCATGCGCCTTCTGCAGATTATGGCCCCGTATATGGTACCAATTATGGGTATTAA 1587 0.4619 MAEHGFDGHDVGYVPEDPNFPQNHSDEHDVGTVIDSSGFPHLLPDEDDAGNLMEDANFPENDFVGHEHDVGGLAGDADSPPEEHVEEVHGAGDVPEDFDSLPKQGSEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCPIPPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQMQMSDVRVNQNLPPHQNWGPPPQGFPAPAGGGGGGGPAFAPNHQYMPPSHHYDSYYPPTELPPMDKHLHQGPPPAYARDASMGIHSSSAQPQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAASATQDPMGGSVSQGYSAYPTTAPVYAPPPTSAGGHTGHAPSADYGPVYGTNYGY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01531 528 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 116 178 IPR036612 GO:0003723
Gma19g01531 528 Coils Coil 459 479 - -
Gma19g01531 528 MobiDBLite consensus disorder prediction 321 378 - -
Gma19g01531 528 CDD PCBP_like_KH 217 285 - -
Gma19g01531 528 ProSiteProfiles Type-1 KH domain profile. 402 466 - -
Gma19g01531 528 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 51 522 - -
Gma19g01531 528 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 212 298 IPR036612 GO:0003723
Gma19g01531 528 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 393 473 IPR036612 GO:0003723
Gma19g01531 528 Pfam KH domain 127 179 IPR004088 GO:0003723
Gma19g01531 528 Pfam KH domain 218 284 IPR004088 GO:0003723
Gma19g01531 528 Pfam KH domain 404 467 IPR004088 GO:0003723
Gma19g01531 528 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 51 522 - -
Gma19g01531 528 Gene3D K Homology domain, type 1 389 478 IPR036612 GO:0003723
Gma19g01531 528 ProSiteProfiles Type-1 KH domain profile. 215 284 - -
Gma19g01531 528 CDD KH-I 404 467 - -
Gma19g01531 528 Gene3D - 124 293 - -
Gma19g01531 528 CDD PCBP_like_KH 126 195 - -
Gma19g01531 528 SMART kh_6 214 289 IPR004087 GO:0003676
Gma19g01531 528 SMART kh_6 123 196 IPR004087 GO:0003676
Gma19g01531 528 SMART kh_6 401 471 IPR004087 GO:0003676
Gma19g01531 528 MobiDBLite consensus disorder prediction 1 39 - -
Gma19g01531 528 ProSiteProfiles Type-1 KH domain profile. 124 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01531 Gma-Chr19 44651316 44656486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01531 K21444 - gmx:100799901 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01531 19 44651316 44656486 Gma03g01473 03 40954893 40959618 GST
Gma19g01531 19 44651316 44656486 Gma10g00318 10 2958518 2964736 PCT
Gma19g01531 19 44651316 44656486 Gma02g01282 02 14911723 14917873 PCT
Gma10g00318 10 2958518 2964736 Gma19g01531 19 44651316 44656486 PCT
Gma02g01282 02 14911723 14917873 Gma19g01531 19 44651316 44656486 PCT