Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00318 ATGTCTGGGGAAGTTTTTGATGGACAAGATGCAGGCTATGTGCCTGAGAACCCTGAGTTTCCGCAAAACCATTCTGACGAATACGATGGAGGAAATGTGATTGATGACTCagggtttccgcaactgcagcctgatgaacacgataatggagggtttccgcagctgcagcctgatgaatatgatgccggagggtttccgcagctgcagcctgatgaacacgatgccggagggtttctgcagctgcagcctgatgaacacaatgccAGCAATTTAGCTGAGGATGGCAATATTCCTGAACATAATTTTGACGGGAATGATGTTGAAGGGTTGCCTGGAAACCCTGATTTGCCTTCTCAAGAGCATGCTGAGGAACAAAATATTGGAGGAGATGTGACTGAGAATTTTGGCTCTGAGGAAAAGCGGGGACCTGAGGAGGATTTGAAAGGAGGTGAAGTAAAGAAGTGGCCAGGGTGGCCTGGAGAGAATGTTTTTAGGATGTTGGTTCCTGTGCAAAAGGTTGGCAGTATTATTGGCCGGAAAGGTGAGTTTATTAGGAAAATTACCGAAGACACTAAGGCTCGTATAAAAATTCTCGATGGTCCTCCTGGAACTTCAGAAAGAGCTGTAATGGTTTCTGCGAAAGAAGAGCCAGATTGCAGCATACCGCCTGCTGTGGATGGTTTGTTAAGGGTTCATAAACAAGTTGTCAATGTAGACCCTCATCCTGCCGATAGTGCATCAGGGGCAGTACGCCCAGTTGTTACAAGGCTTCTAGTGGCAGATACTCAAGCAGGAAGCTTGATTGGGAAGCAGGGCTCCACTATAAAATCCTTTCAAGATGCCACAGGTTGCAATATACGCATTCTTGGTTCAGAACACCTGCCAGTTTTTGCTCTGCGAGATGATAGTATTGTTGAAATACAAGGGGAATCTTCTGGGGTTCACAAGGCGGTTGAACTTGTTGCAATTCATCTACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCACACCAACCTTGGGGTCCTCCTCAAGGTTTTCCAGCTCCTGGGCCTGGTAGTGGTGGTGGACCTGCTTTTCCACCCAATACTCAGTATATGCCGCCTTCACATAATTATGATAATTACTACCCACCTGCTGACCTATCTCCTATGGACAAGCACCTTCATCAGGGTCCACCACCTGCCTATGTAAGAGATGTTTCTATGGGAATTCATTCATCCAGTGCACAGGCACAACAATCTGTTGTGACTAAGGTCACACAACACATGCAAATTCCTTTGTCCTATGCAGATGCTGTTATTGGAGCATCAGGGGCAAACATCAGCTACATCCGTCGAGCTAGTGGAGCAAGTATTACAATTCAGGAGACCAGGGGTGTGCCAGGAGAGATGACTGTTGAGATAAGTGGTACTGCTTCACAAATACAGGCTGCCCAACAGCTAGTGCAGAATTTCATGGCTGAAGCTGCAAGTGCGGCACAGGATCATATGGGGGGTTCAATTAACCAAGGTTACAATTCCTATCCTACAAATCCTGTCTATGCATCTCCGCCCTCAAGTGCTGCTGGTCATGCGGGCCATGCACCTTCTGCAGATTATGGTTCCGTTTACGGCACCAATTATGGCTATTGA 1698 0.4223 MSGEVFDGQDAGYVPENPEFPQNHSDEYDGGNVIDDSGFPQLQPDEHDNGGFPQLQPDEYDAGGFPQLQPDEHDAGGFLQLQPDEHNASNLAEDGNIPEHNFDGNDVEGLPGNPDLPSQEHAEEQNIGGDVTENFGSEEKRGPEEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEEPDCSIPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLRKFLVDRSIVGVFETQMQRPDVRANQNVPPGPPHQPWGPPQGFPAPGPGSGGGPAFPPNTQYMPPSHNYDNYYPPADLSPMDKHLHQGPPPAYVRDVSMGIHSSSAQAQQSVVTKVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQNFMAEAASAAQDHMGGSINQGYNSYPTNPVYASPPSSAAGHAGHAPSADYGSVYGTNYGY 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00318 565 MobiDBLite consensus disorder prediction 346 414 - -
Gma10g00318 565 CDD PCBP_like_KH 254 322 - -
Gma10g00318 565 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 431 511 IPR036612 GO:0003723
Gma10g00318 565 CDD PCBP_like_KH 163 232 - -
Gma10g00318 565 Pfam KH domain 442 505 IPR004088 GO:0003723
Gma10g00318 565 Pfam KH domain 255 321 IPR004088 GO:0003723
Gma10g00318 565 Pfam KH domain 164 216 IPR004088 GO:0003723
Gma10g00318 565 SMART kh_6 251 326 IPR004087 GO:0003676
Gma10g00318 565 SMART kh_6 160 233 IPR004087 GO:0003676
Gma10g00318 565 SMART kh_6 439 509 IPR004087 GO:0003676
Gma10g00318 565 ProSiteProfiles Type-1 KH domain profile. 252 321 - -
Gma10g00318 565 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 87 559 - -
Gma10g00318 565 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 87 559 - -
Gma10g00318 565 ProSiteProfiles Type-1 KH domain profile. 161 228 - -
Gma10g00318 565 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 245 334 IPR036612 GO:0003723
Gma10g00318 565 MobiDBLite consensus disorder prediction 134 152 - -
Gma10g00318 565 CDD KH-I 442 505 - -
Gma10g00318 565 Coils Coil 497 517 - -
Gma10g00318 565 Gene3D - 161 329 - -
Gma10g00318 565 MobiDBLite consensus disorder prediction 1 154 - -
Gma10g00318 565 Gene3D K Homology domain, type 1 427 516 IPR036612 GO:0003723
Gma10g00318 565 MobiDBLite consensus disorder prediction 351 386 - -
Gma10g00318 565 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 153 216 IPR036612 GO:0003723
Gma10g00318 565 ProSiteProfiles Type-1 KH domain profile. 440 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00318 Gma-Chr10 2958518 2964736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00318 K21444 - gmx:100818363 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00318 10 2958518 2964736 Gma02g01282 02 14911723 14917873 GST
Gma19g01531 19 44651316 44656486 Gma10g00318 10 2958518 2964736 PCT
Gma03g01473 03 40954893 40959618 Gma10g00318 10 2958518 2964736 PCT
Gma10g00318 10 2958518 2964736 Gma19g01531 19 44651316 44656486 PCT
Gma10g00318 10 2958518 2964736 Gma03g01473 03 40954893 40959618 PCT