Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01282 ATGTCTGGGGAAGTTTTTGATGGACAAGATGCAGGCTATGTGCCTGAGAACCCTGAGTTTCCACAAAACCATTCTGATGAACACGATGGAGGAAATGTGATTGATGACTCTGGGTTCCCGCAGCTGCAGCCTGATGAACATGATGCTGGAGGGTTTCCGCAGCTGCAGCTGCAGCCTGATGAACACGAAGGCGGCAATTTGGCTGAGGATGCCAATCATCCTGAACATAATTTTGACGGGAATGATGTTGAAGGTTTGCCTGGACCTGATTTTCCTCCTCAAGAGCATGCAGAGGAACAACATGTTGGAGGAGACGTGACTGAGAATTTTGCCTCTGAGGAAAAGCAGGAACCTGAGGAGGATTTGAAAGGAGGTGAAGTAAAGAAGTGGCCAGGGTGGCCTGGAGAGAATGTTTTTAGGATGTTGGTTCCCGTGCAAAAGGTTGGCAGCATTATTGGACGAAAAGGAGAGTTTATTAGGAAAATTACTGAAGAGACTAAGGCTCGTATAAAAATTCTTGATGGTCCTCCTGGGACTGCAGAAAGAGCTGTAATGGTTTCTGCGAAAGAAGAGCCAGATTGCAGCATACCGCCTGCTGTTGATGGTTTGTTAAGGGTTCATAAACAAGTTGTCAACGTGGACCCTCATCCTGCCGATAGTGCATCAGGTGCAGGACGCCCAGTTGTTACAAGGCTTCTAGTGGCAGATACTCAAGCAGGAAGCTTGATTGGGAAGCAGGGGTCCACTATAAAATCCTTTCAAGATGCCACAGGGTGCAATATACGCATTCTTGGTTCAGAACACCTGCCAGTTTTTGCTCTGCGAGATGATAGTGTTGTTGAAATACAAGGGGAATCTTCTGGGGTTCACAAGGCGGTTGAACTTGTTGCAATTCATCTACGTAAATTCTTGGTTGATCGCAGCATAGTTGTAGTATTTGAAACACAAATGCAAAGGCCAGATGTTCGAGTAAACCAGAATGTGCCACCAGGCCCACCACACCAACCTTGGGGTCCTCCTCAAGGTTTTCAAGCTCCTGGACCTGGTAGTGGTGGTGGACCTGCTTTTCCACCCAATCCTCAGTATATGCCGCCTTCACATAACTATGATAATTACTACCCACCTGCTGACCTGCCTCCTATGGACAAGCATCTTCATCAGGGTCCAGCACCTGCCTATGTAAGGGATGCTTCTATGGGAATTCATTCATCCAGTGCACAGCCACAACAATCTGTTGTGACTAAGGTCACGCAGCACATGCAAATTCCTTTGTCCTATGCAGATGCTGTTATTGGAGCATCAGGGGCAAACATCAGCTACATCCGTCGAGCTAGTGGAGCAAGTATTACAATTCAGGAGACCAGGGGTGTGCCAGGAGAGATGACTGTTGAGATAAGTGGTACTGCTTCACAAATACAGGCTGCCCAACAGCTAGTACAGAGCTGCATATAG 1452 0.4745 MSGEVFDGQDAGYVPENPEFPQNHSDEHDGGNVIDDSGFPQLQPDEHDAGGFPQLQLQPDEHEGGNLAEDANHPEHNFDGNDVEGLPGPDFPPQEHAEEQHVGGDVTENFASEEKQEPEEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEETKARIKILDGPPGTAERAVMVSAKEEPDCSIPPAVDGLLRVHKQVVNVDPHPADSASGAGRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLRKFLVDRSIVVVFETQMQRPDVRVNQNVPPGPPHQPWGPPQGFQAPGPGSGGGPAFPPNPQYMPPSHNYDNYYPPADLPPMDKHLHQGPAPAYVRDASMGIHSSSAQPQQSVVTKVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQSCI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01282 483 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 128 191 IPR036612 GO:0003723
Gma02g01282 483 CDD PCBP_like_KH 229 297 - -
Gma02g01282 483 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 63 483 - -
Gma02g01282 483 ProSiteProfiles Type-1 KH domain profile. 415 479 - -
Gma02g01282 483 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 406 483 IPR036612 GO:0003723
Gma02g01282 483 Gene3D K Homology domain, type 1 402 483 IPR036612 GO:0003723
Gma02g01282 483 MobiDBLite consensus disorder prediction 323 389 - -
Gma02g01282 483 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 220 306 IPR036612 GO:0003723
Gma02g01282 483 CDD KH-I 417 480 - -
Gma02g01282 483 ProSiteProfiles Type-1 KH domain profile. 227 296 - -
Gma02g01282 483 SMART kh_6 414 483 IPR004087 GO:0003676
Gma02g01282 483 SMART kh_6 135 208 IPR004087 GO:0003676
Gma02g01282 483 SMART kh_6 226 301 IPR004087 GO:0003676
Gma02g01282 483 Pfam KH domain 417 480 IPR004088 GO:0003723
Gma02g01282 483 Pfam KH domain 230 296 IPR004088 GO:0003723
Gma02g01282 483 Pfam KH domain 139 191 IPR004088 GO:0003723
Gma02g01282 483 Gene3D - 136 304 - -
Gma02g01282 483 MobiDBLite consensus disorder prediction 326 343 - -
Gma02g01282 483 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 63 483 - -
Gma02g01282 483 CDD PCBP_like_KH 138 207 - -
Gma02g01282 483 MobiDBLite consensus disorder prediction 63 80 - -
Gma02g01282 483 ProSiteProfiles Type-1 KH domain profile. 136 203 - -
Gma02g01282 483 MobiDBLite consensus disorder prediction 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01282 Gma-Chr2 14911723 14917873 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01282 K21444 - gmx:100818363 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01282 02 14911723 14917873 Gma02g01282 02 14911723 14917873 ECH
Gma10g00318 10 2958518 2964736 Gma02g01282 02 14911723 14917873 GST
Gma19g01531 19 44651316 44656486 Gma02g01282 02 14911723 14917873 PCT
Gma03g01473 03 40954893 40959618 Gma02g01282 02 14911723 14917873 PCT
Gma02g01282 02 14911723 14917873 Gma19g01531 19 44651316 44656486 PCT
Gma02g01282 02 14911723 14917873 Gma03g01473 03 40954893 40959618 PCT