Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01504 ATGCTCTGTCTCCGGGGAAAGGAAAGTGAGATACTCTCTCTATCACCAAACCAAAAGCACAAAAAAAAAGTAAAAGGGTGTGGTGCTGTTGTGGAGATCCGAGATTTGTTTCGTCTCTTATGCCCCATGAGGAGTTTCTTCCCTGCTGAATCCTGTAAAGAGGCTCACCCAAATGCTTTGAATCCTCAGTCTTGGCTTCATATTGAAAGAGGGAAACTTCCCAAGTTGTCATCACACCCCTCATCTGCCTCAATTGAATCTCTGATCAAGGTCCCACAGCCAGCTATACTGCCTTTCTTTAAGCCTGTTGATTATGTGGAAGTTTTAGCTCGAATCCATGAAGAACTCGAGTCTTGTCCTCCGCAAGAGAGATCAAACTTGTTTTTGTTACAATACCAGGTCTTCAGGGGCCTTGGGGAAGTTAAATTGATGCGTAGAAGCCTCCAGGGAGCTTGGCAGAGAGCTCACACTGTTCATGAGAAGATTATATTTGGGGCATGGCTGAAATATGAGAAGCAAGAGGAAGAGCTAATGGCTGACTTGCTTGCAGCTTGTGGTAAATGTGCGAAGGAGTTTGCACCTGTAGATATAGCATTTCATCTTCCATTTGATGTAAATGCAAGTTCTGAGGGGAGAACGACCAATGAGAACCGCATTTCTCAAAATGTTACTTTTACGATTGGAAGTGAAAAGATAGTTTGTGATAGACAAAAAATTTCAGAACTTTCAGCACCATTTCATGCAATGCTCAAGGGGCATTTCAGTGAATCACTCTCTGAGACAATAGATTTGTCAGAAAACAATATCTCTCCCTCAGGTATGAAGGCAATAAGTGATTTCAGTTTGAATGGCAGTTTAATTGAGGTCCCTCCAAATCTTTTGTTGGAGATATTAGTTTTTGCAAACAAGTATTGTTGTGAAAGACTTAAAGATGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAAAGAAGATGCTGTGGAGCTCATGGAATATGCTCTTGATGAACATTCAAGTGTCCTTGCTGCATCTTGTTTACAAGTCCTTTTGCGTGACCTTCCAAACTGTATGAATGACAATCGGGTGGTGGAGATATTTGTTCATGCTAATAAGCAGCAGCTAGAAGTCATGGTTGGGCCAGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATTTCCTGGAACGGTTAGTTGAGTTTGCTGAGAATGGCAAGCAGAGACTTCTAGCTTTACATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAATATGATGAAGCACGTTGTCTTTTTGAAGGGGCTGTAAATGCAGGCCATATGTATTCTGTGGCAGGTTTAGCTAGACTGGACTATATAAAGGGTGACAAGCTGCTATCTTATGGGCAACTTAGCTCAGTCATTTCATCTGTTACTTCACTTGGATGGATGTATCAGGAAAGATCACTATACTGTGACGGTGACAAAAGGTGGGAGGACCTTGAGAAAGCAAGTAATTTGGATCCTACTCTTATATATCCTTACATGTACAGAGCTGCCACTTTAATGAGGACACAGAATGCTCATGCTGCACTAGCAGAAATCAATCGGATTCTTGGGTTCAAACTTTCACTAGAATGCTTGGAAATACGATTTTTTATCCACCTTTCTCTTGAGGACTATAAAGCAGCTCTATGTGATGTTCAAACAATTCTTACTCTGCGTTCAGATTATAGAATGTTTGAGGGGCGTGTTGCTGCATCCCAACTCTGTACTCTTGTGCGTGAGCATGTTGAACGTTGGACAACTGCAGATTGTTGGGCACGATTATATGATTGTTGGTCTGCAGTTGATGATATTGGATCTCTATCTGTTATCTACCAGATGCTTGAATCTGATGCAGCAAAAGGTATTCTATACTTCAGACAGTCATTGCTTCTCCTAAGGTTGAACTGTCCCGAGGCTGCTATGCGTAGTTTACTGTTAGCTCGGCAACATGCATCAAGTGAGCATGAACGACTTGTATATGAGGGGTGGATCTTATATGATACAGGTCATTATGAGGAAGGGCTCCAGAAAGCTGAAGAGTCTATTGACATCAAAAGATCTTTTGAGGCCTTTTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTATAGATCCATCATGTTCACCAACTGTTATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTTAACAATCTTGGAAGTGTTTATGTTGACTGTGGTAAATTGGACTTGGCTGCTGATTGTTATATCAATGCTCTTAAAATCCGACACACCCGAGCTCATCATGGTCTTGCTCGCGTTCATTGTCTGAAAAATGATAAGGCTGCAGCTTATATGGAAATGACCGAACTTATTAAGAAGGCAAAAAACAATGCATCTGCTTATGAGAAGAGGTCTGAGTACTGTGATCGTGAACAAGCAAAGGCAGATCTGGAGATGGTCACTAGATTAGATCCACTTCGGGCCTATCCTTATAGATATCGTGCTGCAGTATTGATGGACAACCACAAGGAAGAGGAAGCCATTGCAGAACTCTCTAGAGCTATTGCGTTTAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTCCATGAACATAAAGAGGACGTCTTAGGTGCGCTAAGAGACTGTCGTGCTGCTCTCTCAGTTGATCCAAACCACCAAGAAATGCTGGAACTTCATAGTCGAGTCAATAGACACGAGCCATGA 2787 0.4194 MLCLRGKESEILSLSPNQKHKKKVKGCGAVVEIRDLFRLLCPMRSFFPAESCKEAHPNALNPQSWLHIERGKLPKLSSHPSSASIESLIKVPQPAILPFFKPVDYVEVLARIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQGAWQRAHTVHEKIIFGAWLKYEKQEEELMADLLAACGKCAKEFAPVDIAFHLPFDVNASSEGRTTNENRISQNVTFTIGSEKIVCDRQKISELSAPFHAMLKGHFSESLSETIDLSENNISPSGMKAISDFSLNGSLIEVPPNLLLEILVFANKYCCERLKDACDRRLASLVSSKEDAVELMEYALDEHSSVLAASCLQVLLRDLPNCMNDNRVVEIFVHANKQQLEVMVGPGIFALFCFLSEVSMNLNSSSDTTAHFLERLVEFAENGKQRLLALHQLGCVRLLRKEYDEARCLFEGAVNAGHMYSVAGLARLDYIKGDKLLSYGQLSSVISSVTSLGWMYQERSLYCDGDKRWEDLEKASNLDPTLIYPYMYRAATLMRTQNAHAALAEINRILGFKLSLECLEIRFFIHLSLEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGILYFRQSLLLLRLNCPEAAMRSLLLARQHASSEHERLVYEGWILYDTGHYEEGLQKAEESIDIKRSFEAFFLKAYALADSSIDPSCSPTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAAAYMEMTELIKKAKNNASAYEKRSEYCDREQAKADLEMVTRLDPLRAYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGALRDCRAALSVDPNHQEMLELHSRVNRHEP 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01504 928 SUPERFAMILY TPR-like 557 780 IPR011990 GO:0005515
Gma19g01504 928 PANTHER ETO1-LIKE PROTEIN 1 43 928 - -
Gma19g01504 928 Gene3D Potassium Channel Kv1.1; Chain A 213 361 IPR011333 -
Gma19g01504 928 Gene3D Tetratricopeptide repeat domain 401 588 IPR011990 GO:0005515
Gma19g01504 928 Gene3D Tetratricopeptide repeat domain 639 826 IPR011990 GO:0005515
Gma19g01504 928 SMART tpr_5 847 880 IPR019734 GO:0005515
Gma19g01504 928 SMART tpr_5 751 784 IPR019734 GO:0005515
Gma19g01504 928 SMART tpr_5 882 913 IPR019734 GO:0005515
Gma19g01504 928 SMART tpr_5 677 710 IPR019734 GO:0005515
Gma19g01504 928 Coils Coil 803 823 - -
Gma19g01504 928 SUPERFAMILY POZ domain 216 317 IPR011333 -
Gma19g01504 928 ProSiteProfiles TPR repeat profile. 751 784 IPR019734 GO:0005515
Gma19g01504 928 SUPERFAMILY TPR-like 423 585 IPR011990 GO:0005515
Gma19g01504 928 SUPERFAMILY TPR-like 734 919 IPR011990 GO:0005515
Gma19g01504 928 PANTHER ETO1-RELATED 43 928 IPR044631 GO:0010105
Gma19g01504 928 Gene3D Tetratricopeptide repeat domain 827 926 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01504 Gma-Chr19 44393412 44402764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01504 - - gmx:100793740 1760.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01504 19 44393412 44402764 Gma03g01448 03 40692439 40700259 GST
Gma19g01504 19 44393412 44402764 Gma10g00285 10 2599682 2604244 PCT
Gma19g01504 19 44393412 44402764 Gma02g01317 02 15295993 15299841 PCT
Gma10g00285 10 2599682 2604244 Gma19g01504 19 44393412 44402764 PCT
Gma02g01317 02 15295993 15299841 Gma19g01504 19 44393412 44402764 PCT