Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00285 ATGAGGACTTTCTTCACCGCAGAATCGTGTAAAGAAGCACACCATAGTGCTTTGAATCCACAGTCCTGGCTCCAAGTTGAAAGAGGGAAGCTTCCCAGATTGTCATCACAGTCCTCTTCTGCATCAATAGAATCCCTAATCAAGGTCCCACAGTCACCGATACTCCCATTCTTCAAACCTGTTGATTATGTGGAAGTCTTAGCTCAAATCCATGAAGAACTTGAATCTTGTCCTCCACAGGAACAATCAAATCTGTTTTTGTTACAATACCAGGTCTTTAAGGGCCTGGGGGATGTCAAACTGATGCGTAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTGTTCATGAGAAAATTATATTTGGGGCATGGCTGAAGTATGAGAAGCAAGGAGAAGAATTAGTTGCTCAGTTGCTCACAGCTTGTGGTAAATGTGAAAAGGAATTTGGACCCCTAGATGTAGAATCTCATATTCCTTTTGATAAAAATGTAAGTTCCCAAGATAGAGCTTTGATGAATGGGAACGATGCTTCAGAATATGTTATCTTTAAAATTGGAGATGAGAAGATAGTCTGTGATAGACAAAAGATTTCTGAACTTTCAGCACCATTCCATGCAATGCTAAAGGGTTGTTTCAGGGAATCACTTTCTGAGACTATAGATTTGTCTGAAAACAATCTCTCTCCTTCAGGTATGAGGGCAGTAAGTTATTTCAGCTTGACAGACAGTTTACTTGACGTCCCTCCAAATCTTTTGGTGGAAATATTAGCTTTTGCAAATAAGTATTGTTGCGAAGGACTAAAACAGGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAGAGAAGATGCACTGGAACTCATGGAATATGCTGTTGATCAGAATTCAGCTGTCCTTGCGGCTTCTTGTTTACAAGTTCTTTTACGTAATATTCCCAAATGCTTGAGTGACAATCGGGTTGTGGAGTTATTTATTCATGCTAATAAACAGCAGTTGGCAGTCATGGTTGGGCCTGGTATATTTTCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATTTCCTGGAACGGTTAGTTGATTTTGCTGAAAATGACAAGCAGAGACTGCTGGCATTTCATCAATTGGGATGTGTAAGACTCTCAAGGAAAGAATATGATGAAGCCTATTGTCTTTTTGAGAGGGCTTTAAATGTAGGTCATATTTATTCTGTTGCGGGTTTAGCTAGACTGGACTCTATAAAGGGTGAGAAACTTTTATCTTATGAGAAGATCAGCTCAGTCATTTCTTCTGTTACTCCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGATGGTGATTTGAGGCGGAAAGACCTTGAGAAAGCAACTGAACTGGATCCTACTCTTATATATCCCTACATGTATAGGACTGCCTCTTTAATGAAGTCAGGGAATGTTCAAGTTGCACTGGCTGAAATCAACCGGATTCTTGGCTTCAAACTTTCATTAGAGTGCTTGGAACTGCGGTTTTTTATCTATCTGGTCCTTGAGGACTACAAAGCAGCGCTCCGAGATGTTCAAGCAATTCTTTCCCTGTGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACTCTTGTGCGTGAGCATGTCGAACATTGGACAACAGCAGATTGTTGGGCCCGATTATATGACTGTTGGTCTGCTGTTGATGATATTGAGTCTCTATCTGTTATCTACCAGATGCTTGAATCTGATGTAGCAAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTCAGGCTAAACTGTCCTGAGGCTGCCATGCGGAGTTTACAGTTAGCTTGGCAACATGTATCAAGTGAGCATGAAAGACTTGTATATGAGGGCTGGATCTTGTATGATACAGGTCATTGTGAGGAAGGGCTTCAAAAAGCTGAAGAGTCTATTAGTATTAAAAGGTCTTTTGAGGCCTACTTCCTGAAGGCCTATGCATTGGCCGACTCCAGTTTAGATTCATCATGTTCTTCAACTGTTATTTCTCTTCTGGAAGATGCCTTGAGGTGTCCTTCTGATAATCTGCGCAAAGGTCAGGCTCTAAACAATCTTGGAAGTGTTTATGTTGATTGTGGGAAATTGGAGTTAGCAGAAGATTGCTATATCAAGGCCCTTAAAATCCAGCACACCCGAGCCCATCAGGGTCTTGCTCGTGTTCATTTTCTAAAAAATGATAAGGCTGCCGCTTACAAGGAAATGACCAACCTTATTGAGAAGGCAAGAAACAATGCATCAGCATATGAGAAGAGGTCTGAGTATGGTGATCGTGAAATCACAAAGGCAGATCTGGAGATGGTGACTAGATTAGATCCACTTCGGGTGTATCCTTACAGATATCGAGCAGCAGTTCTGATGGACAGCCATAAGGAAGAGGAAGCCATTGCGGAACTCTCTAGAGCAATTGCATTCAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTCCATGAACACAAGGGGGATGTTTTAGGTGCACTAAGAGACTGTCGTGCTGCTCTCTCAGTGGATCCATTCCATCAAAAAATGTTAGAACTTCACTGTCGTGTCAATAGCCACGAGCCATGA 2664 0.4178 MRTFFTAESCKEAHHSALNPQSWLQVERGKLPRLSSQSSSASIESLIKVPQSPILPFFKPVDYVEVLAQIHEELESCPPQEQSNLFLLQYQVFKGLGDVKLMRRSLRSAWQRANTVHEKIIFGAWLKYEKQGEELVAQLLTACGKCEKEFGPLDVESHIPFDKNVSSQDRALMNGNDASEYVIFKIGDEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENNLSPSGMRAVSYFSLTDSLLDVPPNLLVEILAFANKYCCEGLKQACDRRLASLVSSREDALELMEYAVDQNSAVLAASCLQVLLRNIPKCLSDNRVVELFIHANKQQLAVMVGPGIFSLFCFLSEVSMNLNSSSDTTAHFLERLVDFAENDKQRLLAFHQLGCVRLSRKEYDEAYCLFERALNVGHIYSVAGLARLDSIKGEKLLSYEKISSVISSVTPLGWMYQERSLYCDGDLRRKDLEKATELDPTLIYPYMYRTASLMKSGNVQVALAEINRILGFKLSLECLELRFFIYLVLEDYKAALRDVQAILSLCPSYKMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIESLSVIYQMLESDVAKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHVSSEHERLVYEGWILYDTGHCEEGLQKAEESISIKRSFEAYFLKAYALADSSLDSSCSSTVISLLEDALRCPSDNLRKGQALNNLGSVYVDCGKLELAEDCYIKALKIQHTRAHQGLARVHFLKNDKAAAYKEMTNLIEKARNNASAYEKRSEYGDREITKADLEMVTRLDPLRVYPYRYRAAVLMDSHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPFHQKMLELHCRVNSHEP 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00285 887 Gene3D Tetratricopeptide repeat domain 600 772 IPR011990 GO:0005515
Gma10g00285 887 PANTHER ETO1-RELATED 1 887 IPR044631 GO:0010105
Gma10g00285 887 SUPERFAMILY POZ domain 182 276 IPR011333 -
Gma10g00285 887 SUPERFAMILY TPR-like 465 780 IPR011990 GO:0005515
Gma10g00285 887 Coils Coil 755 782 - -
Gma10g00285 887 Gene3D Tetratricopeptide repeat domain 360 547 IPR011990 GO:0005515
Gma10g00285 887 Gene3D Potassium Channel Kv1.1; Chain A 172 320 IPR011333 -
Gma10g00285 887 Gene3D Tetratricopeptide repeat domain 784 884 IPR011990 GO:0005515
Gma10g00285 887 SUPERFAMILY TPR-like 382 838 IPR011990 GO:0005515
Gma10g00285 887 ProSiteProfiles TPR repeat profile. 710 743 IPR019734 GO:0005515
Gma10g00285 887 SMART BTB_4 180 280 IPR000210 GO:0005515
Gma10g00285 887 SMART tpr_5 839 872 IPR019734 GO:0005515
Gma10g00285 887 SMART tpr_5 381 414 IPR019734 GO:0005515
Gma10g00285 887 SMART tpr_5 510 543 IPR019734 GO:0005515
Gma10g00285 887 SMART tpr_5 710 743 IPR019734 GO:0005515
Gma10g00285 887 Pfam Tetratricopeptide repeat 711 739 IPR019734 GO:0005515
Gma10g00285 887 PANTHER ETO1-LIKE PROTEIN 1 1 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00285 Gma-Chr10 2599682 2604244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00285 - - gmx:100782033 1728.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00285 10 2599682 2604244 Gma02g01317 02 15295993 15299841 GST
Gma19g01504 19 44393412 44402764 Gma10g00285 10 2599682 2604244 PCT
Gma03g01448 03 40692439 40700259 Gma10g00285 10 2599682 2604244 PCT
Gma10g00285 10 2599682 2604244 Gma19g01504 19 44393412 44402764 PCT
Gma10g00285 10 2599682 2604244 Gma03g01448 03 40692439 40700259 PCT