Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01317 AtgaggactttcttcactgcagaatcatgtaaagaaacacagcctaatgctttaaatccacagtcctggctccaggttgaaagagggaaGCTTCCCAAATTGTCATCACAGTCCTCTTCTGCATCAATAGAATCTCTAATCAAGGTCCCACAGTCACCTATACTCCCGTTCTTCAAACCTGTTGATTATGTGGAAGTTTTAGCTCAAATCCATGAAGAACTTGAGTCATGTCCTCCTCAGGAAAAGTCAAATCTGTTTTTGTTACAATACCAGGTCTTTAAGGGCCTGGGGGATGTCAAACTAATGCGTAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTGTTCATGAGAAAATTATATTTGGGGCATGGCTGAAGTATGAGAAGCAAGAAGAATTAGTTGCTCAGTTGCTCACAGCTTGTGGTAAATGTGAAAAGGAATTTGGACCCATAGATGTAGAATCTCAGATTCCTTTTGATGAGAATGTAAGATCCCAGGATAGAGCTTCGATGAATGGGAACAATGCTTCAGAATATGTTATCTTTAAAATTGGAGATGAGAAGATAGTCTGTGATAGACAAAAGATTTCTGAACTTTCAGCACCATTTCATGCAATGCTAAAGGGGTGTTTCAGGGAATCACTTTCTGAGACTATAGATTTGTCTGAAAACAATCTCTCTCCTTCAGGTATGAGGGCAATAAGTTATTTTAGCTCGACAGGGAGTTTACTTGATGTCCCTCCGAATCTTTTGGTGGAAATATTAGCTTTTGCAAATAAGTATTGTTGCGAAAGACTAAAACAGGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAGAGAAGATGCTCTGGAACTCATGGAATATGCTGTTGATCAGAATTCAGCTGGCCTTGCGGCTTCTTGTTTACAAGTTCTTTTACGTGATATTCCCAACTGCTTGAGCGACAATCAGGTTGTGGAATTATTTATTCATGCTAATAAGCAGCAGTTGGCAGTCATGGTTGGGCCTGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTAAATTCTAGTTCAGACACAACAGCTCATTTCCTGGAACGGTTAGTTGATTTTGCTGAAAATGACAAGCAGAGACTGCTGGCATTTCATCAATTGGGATGTGTAAGACTCTCAAGGAAAGAATATGATGAAGCCTATTGTCTTTTTGAGAGGGCTTTAAATGTAGGTCATGTTTATTCTGTTGCGGGTTTAGCTAGACTGGACTCTATAAAGGGTGAGAAACTTTTATCTTATGAGAAGATCAGTTCAGTCATTTCTTCAGATACTCCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGATGGTGATTTGAGGCAGAAAGACCTTGAGAAAGCAACTGAACTGGATCCTACTCTTATATATCCCTATATGTATAGGACTGCCTCTTTAATGAAGACAGGGAATGTTCAAGGTGCACTGGCTGAAATCAACCGGATTCTTGGCTTTAAACTTTCGTTAGAGTGCTTGGAATTACGGTTTTTTATCTATCTGGCCCTTGAGGACTACAAAGCAGCAGTCCGAGATGTTCAAGCAATTCTTACCCTGTGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACTCTTGTGCGTGAGCATGTTGAACATTGGACAACAGCAGATTGTTGGGCCCGATTATATGACTGTTGGTCTGCTGTTGATGATATTGAGTCTCTTTCTGTCATCTACCAGATGCTTGAATCTGATGCAGCAAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTCAGGTTAAACTGTCCTGAGGCTGCCATGCGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAAAGACTTGTATATGAGGGGTGGATCTTGTATGATACGGGTCATTGTGAGGAAGGGCTCCAAAAAGCTGAAGAGTCTATTAGTATTAAAAGGTCTTTTGAGGCCTACTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTGTAGATTCATCATGTTCTTCAACTGTTATTTCTCTTCTGGAAGATGCCTTGAGGTGTCCTTCTGATAATCTGCGCAAAGGTCAGGCCCTAAACAATCTTGGAAGTGTTTATGTTGATTGTGGGAAATTGGACTTAGCAGAAGATTGCTATATAAAGGCTCTTAAAATCCAGCACACCCGAGCGCATCAGGGTCTTGCTCGTGTTCATTTTCTCAAAAATGATAAGGCTGCTGCTTACAAAGAAATGACCAATCTTATTGAGAAGGCGAGAAACAATGCATCAGCATATGAGAAGAGGTCTGAGTATGGTGATCGTGATCTCACGAAGGCAGATTTGGAGATGGTGACTAGATTGGATCCACTTCGGGTGTATCCTTATAGATATCGCGCAGCAGTTTTGATGGACAATCATAAGGAAGAGGAAGCCATTGCGGAACTCTCTAGAGCAATTGCATTTAAAGCTGATTTGCACCTCCTGCATCTACGTGCAGCATTCCATGAACACAATGGAGATGTCTTAGGTGCGCTAAGAGACTGTCGTGCTGCGCTCTCAGTGGATCCAAACCACCAAAAAATGTTGGAACTTCATTGTCGTGTTAATAGTCACGAGCCATGA 2661 0.4017 MRTFFTAESCKETQPNALNPQSWLQVERGKLPKLSSQSSSASIESLIKVPQSPILPFFKPVDYVEVLAQIHEELESCPPQEKSNLFLLQYQVFKGLGDVKLMRRSLRSAWQRANTVHEKIIFGAWLKYEKQEELVAQLLTACGKCEKEFGPIDVESQIPFDENVRSQDRASMNGNNASEYVIFKIGDEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENNLSPSGMRAISYFSSTGSLLDVPPNLLVEILAFANKYCCERLKQACDRRLASLVSSREDALELMEYAVDQNSAGLAASCLQVLLRDIPNCLSDNQVVELFIHANKQQLAVMVGPGIFALFCFLSEVSMNLNSSSDTTAHFLERLVDFAENDKQRLLAFHQLGCVRLSRKEYDEAYCLFERALNVGHVYSVAGLARLDSIKGEKLLSYEKISSVISSDTPLGWMYQERSLYCDGDLRQKDLEKATELDPTLIYPYMYRTASLMKTGNVQGALAEINRILGFKLSLECLELRFFIYLALEDYKAAVRDVQAILTLCPSYKMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIESLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHASSEHERLVYEGWILYDTGHCEEGLQKAEESISIKRSFEAYFLKAYALADSSVDSSCSSTVISLLEDALRCPSDNLRKGQALNNLGSVYVDCGKLDLAEDCYIKALKIQHTRAHQGLARVHFLKNDKAAAYKEMTNLIEKARNNASAYEKRSEYGDRDLTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHNGDVLGALRDCRAALSVDPNHQKMLELHCRVNSHEP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01317 886 Gene3D Tetratricopeptide repeat domain 360 546 IPR011990 GO:0005515
Gma02g01317 886 ProSiteProfiles TPR repeat profile. 709 742 IPR019734 GO:0005515
Gma02g01317 886 PANTHER ETO1-RELATED 1 886 IPR044631 GO:0010105
Gma02g01317 886 PANTHER ETO1-LIKE PROTEIN 1 1 886 - -
Gma02g01317 886 SUPERFAMILY TPR-like 381 738 IPR011990 GO:0005515
Gma02g01317 886 SMART BTB_4 179 279 IPR000210 GO:0005515
Gma02g01317 886 Gene3D Potassium Channel Kv1.1; Chain A 171 319 IPR011333 -
Gma02g01317 886 Gene3D Tetratricopeptide repeat domain 782 884 IPR011990 GO:0005515
Gma02g01317 886 SUPERFAMILY POZ domain 181 275 IPR011333 -
Gma02g01317 886 Coils Coil 754 781 - -
Gma02g01317 886 Pfam Tetratricopeptide repeat 710 738 IPR019734 GO:0005515
Gma02g01317 886 Gene3D Tetratricopeptide repeat domain 596 771 IPR011990 GO:0005515
Gma02g01317 886 SUPERFAMILY TPR-like 693 879 IPR011990 GO:0005515
Gma02g01317 886 SMART tpr_5 838 871 IPR019734 GO:0005515
Gma02g01317 886 SMART tpr_5 709 742 IPR019734 GO:0005515
Gma02g01317 886 SMART tpr_5 509 542 IPR019734 GO:0005515
Gma02g01317 886 SMART tpr_5 380 413 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01317 Gma-Chr2 15295993 15299841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01317 - - gmx:100785039 1735.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00285 10 2599682 2604244 Gma02g01317 02 15295993 15299841 GST
Gma19g01504 19 44393412 44402764 Gma02g01317 02 15295993 15299841 PCT
Gma03g01448 03 40692439 40700259 Gma02g01317 02 15295993 15299841 PCT
Gma02g01317 02 15295993 15299841 Gma19g01504 19 44393412 44402764 PCT
Gma02g01317 02 15295993 15299841 Gma03g01448 03 40692439 40700259 PCT