Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01448 ATGAGGAGTTTCTTCCCTGCTGAATCCTGTAAAGAGGCTCACCCAAATGCTTTGAATCCTCAGTCATGGCTTCAAATTGAAAGAGGGAAACTTCCCAAGTTGTCATCATCATCACACCCCTCATCTGCCTCAATTGAATCTCTGATCAAGGTCCCACAGCCAGCTATACTGCCTTTCTTTAAGCCTGTTGATTATGTGGAGGTTTTAGCTCAAATCCATGAAGAACTTGAGTCTTGTCCTCCGCAGGAGAGGTCAAACTTGTTTTTGTTGCAATACCAGGTCTTCAGGGGCCTTGGGGAAGTTAAACTGATGCGTAGAAGCCTCCAGGGAGCATGGCAGAGAGCCCACACTGTTCATGAGAAGATTATATTTGGGGCATGGTTGAAATATGAGAAGCAAGAGGAAGAGCTAATAGCTGACTTGCTTGCAGCTTGTGGTAAATGTGCGAAGGAGTTTGCGCCTGTAGATATAGCGTCTCTTCTTCCATTTGATGTAAATGCAGGTTCCGAGGGGAGAACGACCAATGAGAACTGCATTTCTCAAAATGTTACTTTTACGATTGGAAGTGAAAAGATAATTTGTGAGAGACAAAAAATTTCGGAACTTTCGGCACCATTTCGTGCAATGCTCAAGGGGCATTTCAGTGAATCACTCTCCGAGACTATAGATTTGTCTGAAAATAATATCTCCCCCTCAGGTATGAAGGCAATAAGTGATTTCAGTTTGAATGGCAGTTTAATTGAGGTCCTTCCAAATCTTTTGTTGGAGATATTAGTTTTCGCAAACAAGTATTGTTGTGAAAGACTTAAAGATGCTTGCGATAGAAGACTTGCATCCTTAGTTTCCTCCAAAGAAGATGCTGTGGAGCTCATGGAATATGCTCTTGATGAGCATTCAACTGTCCTTGCTGCATCTTGTTTACAAGTCCTTTTGCGTGATCTTCCAAACTGTTTGAATGACAATCGGGTGGTGGAGATATTTGTTCATGCTAATAAGCAGCAGCTAGCAGTCATGGTTGGGCCAGGTATATTTACACTTTTCTGTTTCTTAGGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATATCCTGGAACGGTTAGTTGAGTTTGCTGAGAATGACCAGCAGAGACTACTCGCTTTACATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAGTATGATGAAGCACGTTGTCTTTTTGAAGGGGCTGTAAATGCAGGCCATATATATTCTGTGGCAGGTTTAGCTAGACTGGACTATATAAAGGGTGACAAGCTTTTATCTTATGGGCAGCTCAACTCAGTCATTTCATCTGTTACTCCACTTGGATGGATGTATCAGGAAAGATCACTATACTGTGACGGTGACAAAAGGTGGGAGGACCTTGAGAAAGCAAGTAATCTGGATCCTACTCTTATATATCCTTACACGTACAGGGCTGCCTCTTTAATGAGAACTCAGAATGCTCAAGCTGCACTAGCAGAAATCAATCGGATTCTTGGGTTCAAACTTTCACCAGAATGTTTGGAAGTACGATTTTTTATCCACCTTTCTCTTGAGGACTACAAAGCAGCTCTATGTGATGTTCAAACAATTCTTACTTTGCGTTCAGATTATAGAATGTTTGAGGGGCGTGTTGCTGCATCCCAACTCTGTACTCTTGTGCGTGAGCATGTTGAGCGTTGGACAACTGCAGATTGTTGGGCACGGTTATATGATTGTTGGTCTGCAGTTGATGATATTGGATCTCTATCTGTTATCTACCAGATGCTTGAATCTGATGCAGCAAAAGGTATTCTATACTTCAGACAGTCATTGCTTCTCCTAAGGTTGAACTGTCCTGAGGCTGCTATGCGGAGTTTACAGTTAGCTCGGCAACATGCATCAAGTGAGCATGAACGTCTTGTATATGAGGGGTGGATCTTATATGATACAGGTCATTATGAGGAAGGGCTCTGGAAAGCTGAAGAGTCTATCAATATCAAAAGATCTTTTGAGGCCTTTTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTATAGATCCATCATGTTCACCAACTGTTATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTTAACAATCTTGGAAGTGTTTATGTTGACTGTGGTAAATTGGACTTGGCCGCTGATTGTTATATCAATGCCCTTAAAATCCGACACACCCGAGCTCATCATGGTCTTGCTCGCGTTCATTGTCTAAAAAATGATAAGGCTGCTGCGTATATGGAAATGACCGAACTTATTAAGAAGGCAAAAAACAATGCCTCTGCTTATGAGAAGAGGTCTGAGTACTGTGATCGTGAACAAGCAAAGGAAGATCTGGAGATGGTCACTAGATTAGATCCACTTCGGGTCTATCCTTATAGATATCGTGCTGCAGTATTGATGGACGACCACAAGGAAGAGGAAGCCATTGCAGAACTCTCTAGAGCTATTGCATTTAAAGCTGATTTGCATCTCTTGCATCTACGTGCAGCATTCCATGAACATAAAGAGGATGTCTTAGGTGCTCTAAGAGACTGTCGTGCTGCCCTCTCAGTGGACCCGAACCACCAAGAAATGTTGGAACTTCATAGCCGAGTCAATAGACACGAGCCATGA 2667 0.4252 MRSFFPAESCKEAHPNALNPQSWLQIERGKLPKLSSSSHPSSASIESLIKVPQPAILPFFKPVDYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQGAWQRAHTVHEKIIFGAWLKYEKQEEELIADLLAACGKCAKEFAPVDIASLLPFDVNAGSEGRTTNENCISQNVTFTIGSEKIICERQKISELSAPFRAMLKGHFSESLSETIDLSENNISPSGMKAISDFSLNGSLIEVLPNLLLEILVFANKYCCERLKDACDRRLASLVSSKEDAVELMEYALDEHSTVLAASCLQVLLRDLPNCLNDNRVVEIFVHANKQQLAVMVGPGIFTLFCFLGEVSMNLNSSSDTTAHILERLVEFAENDQQRLLALHQLGCVRLLRKEYDEARCLFEGAVNAGHIYSVAGLARLDYIKGDKLLSYGQLNSVISSVTPLGWMYQERSLYCDGDKRWEDLEKASNLDPTLIYPYTYRAASLMRTQNAQAALAEINRILGFKLSPECLEVRFFIHLSLEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGILYFRQSLLLLRLNCPEAAMRSLQLARQHASSEHERLVYEGWILYDTGHYEEGLWKAEESINIKRSFEAFFLKAYALADSSIDPSCSPTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAAAYMEMTELIKKAKNNASAYEKRSEYCDREQAKEDLEMVTRLDPLRVYPYRYRAAVLMDDHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGALRDCRAALSVDPNHQEMLELHSRVNRHEP 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01448 888 Gene3D Tetratricopeptide repeat domain 599 786 IPR011990 GO:0005515
Gma03g01448 888 SUPERFAMILY TPR-like 384 740 IPR011990 GO:0005515
Gma03g01448 888 Coils Coil 763 783 - -
Gma03g01448 888 SMART tpr_5 603 636 IPR019734 GO:0005515
Gma03g01448 888 SMART tpr_5 840 873 IPR019734 GO:0005515
Gma03g01448 888 SMART tpr_5 711 744 IPR019734 GO:0005515
Gma03g01448 888 ProSiteProfiles TPR repeat profile. 711 744 IPR019734 GO:0005515
Gma03g01448 888 PANTHER ETO1-RELATED 1 888 IPR044631 GO:0010105
Gma03g01448 888 Gene3D Tetratricopeptide repeat domain 350 548 IPR011990 GO:0005515
Gma03g01448 888 SUPERFAMILY TPR-like 694 879 IPR011990 GO:0005515
Gma03g01448 888 PANTHER ETO1-LIKE PROTEIN 1 1 888 - -
Gma03g01448 888 SUPERFAMILY POZ domain 181 277 IPR011333 -
Gma03g01448 888 Gene3D Tetratricopeptide repeat domain 787 886 IPR011990 GO:0005515
Gma03g01448 888 Gene3D Potassium Channel Kv1.1; Chain A 175 321 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01448 Gma-Chr3 40692439 40700259 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01448 - - gmx:100806268 1757.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01504 19 44393412 44402764 Gma03g01448 03 40692439 40700259 GST
Gma03g01448 03 40692439 40700259 Gma10g00285 10 2599682 2604244 PCT
Gma03g01448 03 40692439 40700259 Gma02g01317 02 15295993 15299841 PCT
Gma10g00285 10 2599682 2604244 Gma03g01448 03 40692439 40700259 PCT
Gma02g01317 02 15295993 15299841 Gma03g01448 03 40692439 40700259 PCT