Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01480 ATGCTTCCTCCTGAAAGTTCTAAACTCAACGCAATGGAGCTTAGCAAAGTCACGTTAGAGATCTTTTCAAAATTGGAGCAGCAATGGCTCTCGCACTACGAAGCATCAACCAAAACGCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGCCTCCCTCGTCCACCTCGAAGACCAGATCCGCGCCCAAACCTCCGATCCTCACACGCAAATCGCCGATTACTTCGACATTATCGCCGGAACCGGCATTGGCGCAATCCTCGCCTCCATGATCACCGCCGACGACGGTTTCGGCCGGCCTCTGTACTCCGCCAGAGACGCCGTCAACTTCCTCGCCGAAAACAACCGCGAACTCTACCAGCCGAAGCGCGCCGGCGTGCTCCGCCGACGCCGTAGATTCTCCGCGCGGAGCATGGAAGAGGCGCTGAAGCGCGTTTTCAAGAGGAAAGAGGGAGAAAAACTGTTGTTGACTCTGAAGGACACGTGTAAGCCGCTCCTTATCCCTTGCTTTGACCTCAAGAGCTCTGCGCCGTTCGTGTTCTCCCGAGCCGACGCGTCCGAGTCACCGAGCTTCAACTTCGAGCTTTGGAAGGCGTGCCGCGCCACGTCGGCGACCCCTGGCCTCTTCACTCCCTTCCACTTCTCCTCCGTCGACGGAAAAACCTCGTGCGCCGCCGTCGACGGCGGCCTGGTGATGAACAATCCGGCAGCAGCTGCCGTCACGCACGTCCTCCACAACAAGCGCGATTTCCCGTCGGTGAACGGCGTGGAGGATCTCCTCGTCCTGTCCATCGGAAACGGAGCTCAGGCGAAGAGAATGAACAACGCCGGCGAGTGCTCCACGTCGACGGTGGTTGACATTACGCTCGACGGCATTTCCGAGACCGTTGACCAGATGCTAGGGAACGCCTTCTGTTGGAACCGTATGGATTATGTCAGGATTCAGGCATTTGGTTTGGGAGATCAAGGAAAAGAAGAGAAGGTGCTGAACGAGAGAGTCCTGGAATCGTTACCGTTCGGGGGAAAGCGGTTACTGCAGGAGACTAACGGTAACAGAATCGAGAGCTTCGTGCAACGTCTTGTTGCTACTGGGAAGACAAGTCTTCCACCTAGTCCGTGCAAGCTTCCGCCGTAA 1149 0.5727 MLPPESSKLNAMELSKVTLEIFSKLEQQWLSHYEASTKTRILSIDGGGTTAIVAGASLVHLEDQIRAQTSDPHTQIADYFDIIAGTGIGAILASMITADDGFGRPLYSARDAVNFLAENNRELYQPKRAGVLRRRRRFSARSMEEALKRVFKRKEGEKLLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKACRATSATPGLFTPFHFSSVDGKTSCAAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAQAKRMNNAGECSTSTVVDITLDGISETVDQMLGNAFCWNRMDYVRIQAFGLGDQGKEEKVLNERVLESLPFGGKRLLQETNGNRIESFVQRLVATGKTSLPPSPCKLPP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01480 382 Pfam Patatin-like phospholipase 42 244 IPR002641 GO:0006629
Gma19g01480 382 PANTHER PATATIN-LIKE PROTEIN 6 5 382 - -
Gma19g01480 382 CDD Pat17_PNPLA8_PNPLA9_like 41 342 - -
Gma19g01480 382 PANTHER PATATIN 5 382 - -
Gma19g01480 382 SUPERFAMILY FabD/lysophospholipase-like 38 353 IPR016035 -
Gma19g01480 382 Gene3D Cytosolic phospholipase A2 catalytic domain 28 373 - -
Gma19g01480 382 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 42 245 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01480 Gma-Chr19 44100191 44101734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01480 12 379 Acyl Lipid Metabolism Gene Families AT3G63200 68.984 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01480 - - gmx:100784729 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01480 19 44100191 44101734 Gma19g01480 19 44100191 44101734 ECH
Gma19g01480 19 44100191 44101734 Gma03g01419 03 40356968 40358462 GST
Gma19g01480 19 44100191 44101734 Gma10g00257 10 2375214 2376683 PCT
Gma19g01480 19 44100191 44101734 Gma02g01341 02 15552256 15553556 PCT
Gma10g00257 10 2375214 2376683 Gma19g01480 19 44100191 44101734 PCT
Gma02g01341 02 15552256 15553556 Gma19g01480 19 44100191 44101734 PCT