Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01419 ATGGAGCTTAGCAAATTGACGTTAGAGATCTTCTCAAAATTGGAGCAGCAATGGCTCTCGCACTACGAAGCATCAACCAAAACGCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGCTTCCCTCGTCCACCTCGAGGACCAGATCCGCGCCCAAACCTCCGATCCTCACGCGCAAATCACTGATTACTTTGACATCATCGCCGGCACCGGCATTGGCGCCATCCTCGCCGTCATGATCACCGCCGACGACGGCTTCGGCCGGCCTCTGTACACCGTCAGAGACGCCGTCAACTTCCTCGCCGAAAACAACCGCGAACTCTACAAGCCGAAACGCGCCGGCGTGTTCCGCCGACGCCGTAGATTCTCCGCGAGGAGCATGGAAAACACGCTAAAGCGCGTTTTCAAGAGAAAAGAGGGAGAAGAACGGTTGTTGACTCTGAAGGACACGTGTAAGCCGCTACTTGTCCCTTGCTTTGACCTCAAGAGCTCTGCGCCGTTCGTGTTCTCCCGAGCCGACGCGTCCGAGTCACCGAGTTTCAACTTCGAGCTTTGGAAGGCGTGCCGCGCCACGTCAGCGACTCCTGGCGTTTTCGCGCCCTTTCACTTCTCCTCCGTCGACGGAAAAACCTCGTGCGCCGCCGTCGACGGCGGCTTAGTGATGAACAATCCGGCCGCGGCGGCGGTCACGCACGTCCTCCACAACAAGCGCGACTTCCCGTCGGTGAACGGCGTGGAGGATCTCCTTGTTCTCTCCATCGGAAACGGAGCTCCGGCGAAGAGAATGAACAATGCCGGCGAGTGCTCTACGTCAATGCTGATTGACATTGCGCTCGACGGTGTTTCAGAGACCGTTGACCAGATGCTAGGGAACGCCTTCTGTTGGAATCGTACCGACTATGTCAGGATTCAGGCTATCGGATTAGGAGATCAAGGAAAAGATGATGAGAAGGTACTGAACGAGAGAGTCCTTGAATCGTTACCGTTTGGGGGAAAACGGTTACTGCAGGAGACAAACGGTAACAGAATTGAGAGCTTCGTGCAACGTCTTGTTGCTACTGGGAAGACAAGTCTTCCACCTAGTCCGTGCAAGCTTCCGCCGTAA 1119 0.5621 MELSKLTLEIFSKLEQQWLSHYEASTKTRILSIDGGGTTAIVAGASLVHLEDQIRAQTSDPHAQITDYFDIIAGTGIGAILAVMITADDGFGRPLYTVRDAVNFLAENNRELYKPKRAGVFRRRRRFSARSMENTLKRVFKRKEGEERLLTLKDTCKPLLVPCFDLKSSAPFVFSRADASESPSFNFELWKACRATSATPGVFAPFHFSSVDGKTSCAAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKRMNNAGECSTSMLIDIALDGVSETVDQMLGNAFCWNRTDYVRIQAIGLGDQGKDDEKVLNERVLESLPFGGKRLLQETNGNRIESFVQRLVATGKTSLPPSPCKLPP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01419 372 Pfam Patatin-like phospholipase 31 233 IPR002641 GO:0006629
Gma03g01419 372 CDD Pat17_PNPLA8_PNPLA9_like 30 321 - -
Gma03g01419 372 Gene3D Cytosolic phospholipase A2 catalytic domain 18 363 - -
Gma03g01419 372 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 234 IPR002641 GO:0006629
Gma03g01419 372 SUPERFAMILY FabD/lysophospholipase-like 27 315 IPR016035 -
Gma03g01419 372 PANTHER PATATIN 2 372 - -
Gma03g01419 372 PANTHER PATATIN-LIKE PROTEIN 6 2 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01419 Gma-Chr3 40356968 40358462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01419 1 369 Acyl Lipid Metabolism Gene Families AT3G63200 69.067 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01419 - - gmx:100806989 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01419 03 40356968 40358462 Gma03g01419 03 40356968 40358462 ECH
Gma19g01480 19 44100191 44101734 Gma03g01419 03 40356968 40358462 GST
Gma03g01419 03 40356968 40358462 Gma10g00257 10 2375214 2376683 PCT
Gma03g01419 03 40356968 40358462 Gma02g01341 02 15552256 15553556 PCT
Gma10g00257 10 2375214 2376683 Gma03g01419 03 40356968 40358462 PCT
Gma02g01341 02 15552256 15553556 Gma03g01419 03 40356968 40358462 PCT