Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01341 ATGGAGTTTAGTAAAGTCACTCTGGAGATCTTCTCCAAACTGGAGCACAAATGGCTCTCTCATTGTAAAGCTACCAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGAAGCTCTCATCTACCTCGAGGATCAGATCCGTCTCCACACCTCCGATCCTCACGCTCAGGTAGCCGATTTCTTCGACATCGTCGCCGGCACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGCGACGCCTTCGGCAGGCCGCTCTACACCGCCAGGGAAGCCGTCCGTCTCGTTTCGGAGAGAAACTCCGAACTCTACAAGCTGAAATCCGGCGGAATCTTCCGCCGGCGCCGGAGATTCTCCTCCAGTAGCATGGACAACGCGTTGAAGCAAGTGTTCCGGAGAAAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGGTCCTTATTCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTGTTTTCGCGCGCCGACGCGTCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGCCGAGCCACGTCAGCGACGCCGAGCCGCTTCAAGCCATTCGACTTAGCTTCCGTCGACGGCAAGACCTCCTGCTCCGCCGTGGACGGCGGCCTTGTGATGAACAACCCTACGGCGGCGGCCGTCACGCACGTCCTCCACAACAAGCGCGATTTCCCGTTGGTTAACGGCGTGGAGGATCTCCTGGTCCTCTCCTTGGGGAACGGATCGTCGAACGCAAAAGCGTGCGAGAGTCGCACGTGCTCAACGCCGTCGGTGGTTGACATTGTACTCGACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAATGCCTTCTGCTGGAACCGTACGAACTACGTCAGAATCCAGGCGTTCGGCTTGGGAAATGAAGCAATGAAGAAGGAAGAGTTTCTCCAAGAGAGGGGACTCGAATCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAATGGAAACAGAATAGATAGCTTCGTGCAACGtCTTGTTGCTACCGGAAAACCAAGCCCGCCGTCAAGTCCCTGCAAGGATTCCGCCGTCAACCCTCTCGCTAATGGCCGCTAG 1140 0.5746 MEFSKVTLEIFSKLEHKWLSHCKATNKTRILSIDGGGTTAIVAGEALIYLEDQIRLHTSDPHAQVADFFDIVAGTGIGAILAAMITAGDAFGRPLYTAREAVRLVSERNSELYKLKSGGIFRRRRRFSSSSMDNALKQVFRRKEDGRLLTLKDTCKPVLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSRFKPFDLASVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPLVNGVEDLLVLSLGNGSSNAKACESRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTNYVRIQAFGLGNEAMKKEEFLQERGLESLPFGGKRLLTETNGNRIDSFVQRLVATGKPSPPSSPCKDSAVNPLANGR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01341 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Gma02g01341 379 MobiDBLite consensus disorder prediction 357 379 - -
Gma02g01341 379 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 379 - -
Gma02g01341 379 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Gma02g01341 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Gma02g01341 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Gma02g01341 379 PANTHER PATATIN-LIKE PROTEIN 6 1 379 - -
Gma02g01341 379 SUPERFAMILY FabD/lysophospholipase-like 26 321 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01341 Gma-Chr2 15552256 15553556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01341 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 70.130 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01341 - - gmx:100795441 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01341 02 15552256 15553556 Gma02g01341 02 15552256 15553556 ECH
Gma10g00257 10 2375214 2376683 Gma02g01341 02 15552256 15553556 GST
Gma19g01480 19 44100191 44101734 Gma02g01341 02 15552256 15553556 PCT
Gma03g01419 03 40356968 40358462 Gma02g01341 02 15552256 15553556 PCT
Gma02g01341 02 15552256 15553556 Gma19g01480 19 44100191 44101734 PCT
Gma02g01341 02 15552256 15553556 Gma03g01419 03 40356968 40358462 PCT