Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00257 ATGGAGTTTAGTAACCTCACTCTGGAGATCTTCTCCAAACTGGAGCAAAAATGGCTCTCACATTGTAAAGCCACCAACAAAACTCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGAAGCTCTCATCTACCTCGAGGATCAGATCCGTGTTCACACCTCCGATCCTCACGCTCAGGTAGCCGATTTCTTCGACATCGTCGCCGGCACCGGCATTGGCGCCATCCTTGCCGCCATGATCACCGCCGGCGACGCCTTTGGTAGGCCGCTCTACACCGCCAGGGAAGCCGTCCGTCTCGTCTCGGAAAGAAACTCTGAACTCTACAAGCTCAAATCCGGCGGAATCTTCCGCCGGCGCCGGAGATTCTCCTCCAGGAGCATGGACAACGCGTTGAAGCAAGTGTTCCAGAGAAAGGAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTCCTTATTCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTGTTTTCGCGCGCCGACGCGTCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGCCGTGCCACGTCAGCGACGCCGAGCCACTTCAAGCCGTTCGACTTCGCTTCCGTCGACGGCAAGACCTCGTGCTCCGCCGTCGACGGCGGCCTAGTCATGAACAACCCTACTGCAGCGGCCGTCACGCACGTCCTCCATAACAAGCGCGATTTCCCGTCGGTGAACGGCGTGGAGGATCTGCTCGTCCTTTCCTTGGGGAACGGATCGTCGAACGCAAAAGCGTGCGAGACTCGCACGTGCTCAACGCCGTCGGTGGTTGACATTGTGCTCGACGGTGTTTCCGAGACCATTGACCAGATGTTAGGGAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCTTTCGGTTTGGAAAGTGAAGCAATGAAGAAGGAAGAGGTTCTCAAAGAGAGGGGACTCGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACAGAGACTAACGGAAACAGAATAGATAGCTTCGTGCAACGTCTTGTTGCTACCGGAAAACCAAGCCCGCCGTCAAGTCCCTGCAAGGATTCCGCCGTCAACCCTCTCGCTAACGGTCGCTAG 1143 0.5704 MEFSNLTLEIFSKLEQKWLSHCKATNKTRILSIDGGGTTAIVAGEALIYLEDQIRVHTSDPHAQVADFFDIVAGTGIGAILAAMITAGDAFGRPLYTAREAVRLVSERNSELYKLKSGGIFRRRRRFSSRSMDNALKQVFQRKEEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDFASVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSSNAKACETRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLESEAMKKEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVATGKPSPPSSPCKDSAVNPLANGR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00257 380 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 234 IPR002641 GO:0006629
Gma10g00257 380 Gene3D Cytosolic phospholipase A2 catalytic domain 17 361 - -
Gma10g00257 380 PANTHER PATATIN 2 369 - -
Gma10g00257 380 PANTHER PATATIN-LIKE PROTEIN 6 2 369 - -
Gma10g00257 380 SUPERFAMILY FabD/lysophospholipase-like 26 315 IPR016035 -
Gma10g00257 380 MobiDBLite consensus disorder prediction 358 380 - -
Gma10g00257 380 Pfam Patatin-like phospholipase 31 233 IPR002641 GO:0006629
Gma10g00257 380 CDD Pat17_PNPLA8_PNPLA9_like 30 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00257 Gma-Chr10 2375214 2376683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00257 1 380 Acyl Lipid Metabolism Gene Families AT3G63200 70.466 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00257 - - gmx:100777557 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00257 10 2375214 2376683 Gma10g00257 10 2375214 2376683 ECH
Gma10g00257 10 2375214 2376683 Gma02g01341 02 15552256 15553556 GST
Gma19g01480 19 44100191 44101734 Gma10g00257 10 2375214 2376683 PCT
Gma03g01419 03 40356968 40358462 Gma10g00257 10 2375214 2376683 PCT
Gma10g00257 10 2375214 2376683 Gma19g01480 19 44100191 44101734 PCT
Gma10g00257 10 2375214 2376683 Gma03g01419 03 40356968 40358462 PCT