Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01067 ATGGGTGCGAGTCGAAAACTCCAGGGGGAGATAGATCGCGTTCTCAAGAAGGTCCAGGAAGGCGTTGAAGTCTTCGATAGCATCTGGAACAAGGTTTACGACACTGACAATGCTAACCAGAAGGAGAAATTTGAAGCGGACCTCAAGAAGGAGATTAAGAAGCTGCAGAGGTACAGAGACCAAATTAAGACTTGGATTCAGTCCAGTGAGATCAAGGACAAGAAGGTTAGTGCCTCATATGAGCAGGCTTTGGTGGATGCACGCAAGATAATTGAGCGAGAAATGGAAAGATTTAAGATATGTGAGAAGGAAACTAAGACCAAAGCATTCTCCAAAGAAGGCTTGGGTCAACAGCCTAAGACTGATCCAAAAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTAAACAATGTGGTTGGAGAGTTAGAATCCCAAATTGATAACTTTGAAGCGGAGCTTGAAGGGCTTTCCGTTAAGAAAGGAAAGAGCAGGCCACCCAGATTGACACATTTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAAAAATGTGAATTCATTTTGAGGCTACTAGATAATGATGAATTAAGTCCTGAGGAGGTTAATGATGTCAAAGATTTCTTAGATGACTATGTTGAGCGTAATCAGGATGATTTTGATGAATTTGATGATGTTGACGAACTATACAGTTCATTACCTTTAGATAAGGTGGAGACTCTAGAAGATCTTGTTACAATTCCCCCTGGTCTTTCTAAGGTGGCACCTAGTCTTAGCTTGAAGAATACTTTGACAGTATCAGCATCACAATCAGCATCTGCATCGCAAACATCTGAGCAAGCTGATGACACAACGTCCCAGGATAGCAATTCTGACATTGTTGCCAAAACTCCACCTTGTAAAAGTGGGGGAATTAGTTCTGCTACCTCAACTCCTGTTGACCATGCTACTCCTGTTTCTGTGAATGTTTCTGGTCATAACTTGTCTAGTGCACCTGTTGCAGTCCTACCTGGTTCAAATTCTGTGCGGAATGTCTTAGAGAATACTAATGTTATCAATTCATCATCTGTAAATCAGTCTACCTCTACAAATGAAGAAGAGATTAATAGCTTCCCTAGCCGGAGACCATCTCCATCGCTTTCTGATGCAACACTTTTGAAGGGCAGAAGCAGCCTGTCAAATCAAGCAACAGCCAGCATTCCTCTTGGTTCTGGAAACATGGTTTCTAGCAATGGTGCCCTTGGATCAGTCTCTTCAGCCTCTGAAATAGCTAAAAGGAACATATTGGGAGCTGATGATAGGCTTGGAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCGCTAAGTAATAGATTGATCTTGCCTCAGGCTGCAAAGGCTAATGATGGAACTGTTTTAGTTGACTCTAGTACTGTTAATGAAGCAGCATCTGGGAGAGTTTTCTCCCCTTCTGGGGTTCCTGGCATGCAATGGAGACCTGGAAGTCCCTTTCAGAATCAGAATGATGCAGGCCAGCTTCGTGGAAGAACTGAAATAGCACCTGATCAAAGGGAAAAGTTTTTGCAGAAGTATCAGCAAGTGCAACAAGGgaatagtaccctccttaatatgaatagtaccctccttaatatgCCTTCTCTAGTTGGGGGAAACCATAAGCAGTTTTCTGCCCAGCAGCAAAATCCCCTTTTGCAGCAGTTTAACTCTCATGGCTCATCTGTTTCTTCTCAGTCTGGTATTGGACTTGGGGTCCAGTCCACAAGTCTCGTTGGTATTTCTTCTGCTTCACTACAGCAGCCACCCAATCCTGTCCATTCCCCCTCTAGTCAACAGCCATTGATGCCAGGTGTTTCTATAGATGCAGatgttggcaattctaagattgaagaacagcagcagcatcagaatttccctgatgattcaacaacAGAATCTACTGCTAGCACTGGGATTGGCAAGAATCTCATAAATGAAGATGATTCAAAATCAGCATTTGCTTTAGATTCTCCTGCAGGAGTGTCTGCCTCTCTTCCAGAATCTGCTCAAACTTCCAGGGATATCGATTTGTCTCCTGGCCAACCATTACAACCTAATCAACCTACTGGCAACCTTGGTGTCATTGGAAGAAGAAATGGTGCTGAACATGGAGCCATTGGTGATAATTTTAGTGGATCAAGTGTTAGTTCTGGTGGAGTGCGTGATCAATTATATAATTTGCAAATGCTTGAGGCAGCCCACTTCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCTAAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATTGTTAATAATCCTGCTTTTTGGGAGAGAGTCGGTCTTGAACCATTTGGCACTGATACTCTGTTCTTTGCATTTTATTATCAACAGAATACTTACCAACAATATTTGGCTGCAAAGGAGTTAAAGAAGCAGTCTTGGAGATACCACCGAAAGGAACTTATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATGGTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATTATCTTGAAGATGATCTTCTTGTATAGAAGATGCCATCTGGTATTGCAAATTATGTTTGGAATTGTTGACAGAGAAGTTATTTATTCAATGCACATCGTGACTAGCAGCTTTGGACCCGTTTTCGAGGAAAATATATTCTTGCTCGTGTTTGCTGTTCATATTGGAGTTGTTCGTCCTTTGTTTGACCAACTGGTAGCGGGTTGTTGGCATGTTAAGACTTCAAAATTCAGGGGATGGACCGAAATCCCACACCCCCACTAA 2847 0.4099 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKIIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKSRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVERNQDDFDEFDDVDELYSSLPLDKVETLEDLVTIPPGLSKVAPSLSLKNTLTVSASQSASASQTSEQADDTTSQDSNSDIVAKTPPCKSGGISSATSTPVDHATPVSVNVSGHNLSSAPVAVLPGSNSVRNVLENTNVINSSSVNQSTSTNEEEINSFPSRRPSPSLSDATLLKGRSSLSNQATASIPLGSGNMVSSNGALGSVSSASEIAKRNILGADDRLGSSGMVQPLVSPLSNRLILPQAAKANDGTVLVDSSTVNEAASGRVFSPSGVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKYQQVQQGNSTLLNMNSTLLNMPSLVGGNHKQFSAQQQNPLLQQFNSHGSSVSSQSGIGLGVQSTSLVGISSASLQQPPNPVHSPSSQQPLMPGVSIDADVGNSKIEEQQQHQNFPDDSTTESTASTGIGKNLINEDDSKSAFALDSPAGVSASLPESAQTSRDIDLSPGQPLQPNQPTGNLGVIGRRNGAEHGAIGDNFSGSSVSSGGVRDQLYNLQMLEAAHFKIPLPKDSERPRTYTPKHPTITPPSYPQVQAPIVNNPAFWERVGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKELMCTLISILQMMTCNMDGVKESRLNSLLSIIILKMIFLYRRCHLVLQIMFGIVDREVIYSMHIVTSSFGPVFEENIFLLVFAVHIGVVRPLFDQLVAGCWHVKTSKFRGWTEIPHPH 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01067 948 Coils Coil 41 61 - -
Gma19g01067 948 Pfam NOT2 / NOT3 / NOT5 family 746 832 IPR007282 GO:0006355
Gma19g01067 948 MobiDBLite consensus disorder prediction 353 384 - -
Gma19g01067 948 MobiDBLite consensus disorder prediction 675 705 - -
Gma19g01067 948 Gene3D - 730 835 IPR038635 -
Gma19g01067 948 PANTHER BNAA10G16600D PROTEIN 1 830 - -
Gma19g01067 948 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Gma19g01067 948 MobiDBLite consensus disorder prediction 594 655 - -
Gma19g01067 948 MobiDBLite consensus disorder prediction 483 503 - -
Gma19g01067 948 MobiDBLite consensus disorder prediction 669 729 - -
Gma19g01067 948 MobiDBLite consensus disorder prediction 752 774 - -
Gma19g01067 948 MobiDBLite consensus disorder prediction 269 318 - -
Gma19g01067 948 MobiDBLite consensus disorder prediction 110 131 - -
Gma19g01067 948 PIRSF NOT_su_3_5 1 847 IPR012270 GO:0006355|GO:0030015
Gma19g01067 948 PANTHER CCR4 NOT-RELATED 1 830 IPR040168 GO:0030015
Gma19g01067 948 MobiDBLite consensus disorder prediction 594 615 - -
Gma19g01067 948 Coils Coil 132 159 - -
Gma19g01067 948 MobiDBLite consensus disorder prediction 625 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01067 Gma-Chr19 38704497 38724517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01067 K12580 - gmx:100785965 1563.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01067 19 38704497 38724517 Gma19g01067 19 38704497 38724517 ECH
Gma19g01067 19 38704497 38724517 Gma16g00384 16 4004968 4015315 GST
Gma19g01067 19 38704497 38724517 Gma16g01391 16 32920788 32934240 PCT
Gma19g01067 19 38704497 38724517 Gma02g00644 02 6293433 6304735 PCT
Gma16g01391 16 32920788 32934240 Gma19g01067 19 38704497 38724517 PCT
Gma02g00644 02 6293433 6304735 Gma19g01067 19 38704497 38724517 PCT