Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00384 ATGGGTGCGAGTAGAAAACTCCAGGGAGAGATAGATCGCGTTCTCAAGAAGGTTCAGGAAGGCGTTGAAGTCTTCGATAGCATCTGGAACAAGGTTTACGACACTGACAATGCTAACCAGAAGGAGAAATTTGAAGCGGACCTCAAGAAGGAGATTAAGAAGCTCCAGAGGTACAGAGACCAAATTAAGACTTGGATTCAGTCCAGTGAGATCAAAGACAAAAAGGTTAGTGCCTCATATGAGCAGGCTTTGGTGGATGCACGCAAGCTAATTGAGCGGGAAATGGAAAGATTTAAGATATGTGAGAAGGAAACTAAGACCAAAGCATTCTCCAAAGAAGGCTTGGGTCAACAGCCTAAGACTGATCCAAAAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTAAACAATGTGGTTGGAGAGTTAGAATCCCAAATTGATAGCTTTGAAGCAGAGCTTGAAGGGCTTTCTGTTAAGAAAGGAAAGACCAGGCCACCCAGATTGACACATCTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAAAAATGTGAATTCATTTTGAGGCTACTAGATAATGATGAATTAAGTCCTGAGGAGGTTAATGATGTCAAAGATTTCTTGGATGACTATGTTGAGCGTAATCAGgatgattttgatgaATTTGATGACGTTGATGAACTATACAGTTCATTACCTTTAGATAAGGTGGAGACTCTAGAAGATCTTGTTACAATTCCCCCTGGTCTTTCTAAGGTGGCACCTAGTCTTAGCTTGAAGAATACTTTGACAGTATCAGCATCACAATCAGCATCTGCATCGCAAACATCTGAGCAAGCTGATGACACAGAGTCCCAGGATAGCAATTCTGACATTGTTGCCAAAACTCCACCTCCTAAAAGTGGGGGAATTAGTTCTGCTACTTCAACTCCTGTTGGCAACCATGCAACTCCTGTTTCCGTGAATATTTCTGGTCATAACTTGTCTGGTGCACCTGTTGCAGCCCTACCTAGTTCAAATTCTGTGCGGAATGTCTTAGAGAATACTAATGTTACCAATTCATCATCTGTAAATCAGTCTACCTCTACAAAGGAAGAAGATATTAATAGCTTCCCTAGCCGGAGACCGTCTCCATCACTTTCTGATGCAACACTTTTGAGGGACAGAAACAGCCTATCAAATCAAGCAACAGCCAGCGTTCCTCTTGGTTCTGGAAACATGGTTTCTAGCAATGTGGCCCTTGGATCAGTCTCTTCAGCCTCTGAAATAGCTAAAAGGAACATAATGGGAGCTGATGATAGACTTGGAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCGCTAAGTAATAGATTGATCTTGCCTCAGGCTGCAAAGGCTAATGATGGAATTGTTTCAGTTGACTCTAGTACTGTTAATGAAGCCGCAGCCGGGAGAGTTTTCTCCCCTTCTGGGGTTCCTGGCATGCAATGGAGACCTGGAAGTCCCTTTCAGAATCAGAATGATGCAGGCCAGCTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAAGTTTTTGCAGAAGTATCAGCAAGTGCAACAAGGGCATAGTACCCTTCTTAATATGCCTTCTCTTGTTGGGGGAAACCATAAGCAGTTTTCTGCCCAGCAGCAAAATCCCCTTTTGCAGCAGTTTAACTCTCATGGCTCATCTGTTTCTTCTCAATCTGGTATTGGACTTGGGGTCCAGTCCACAAGTCTTGGTGGTATTTCTTCTGCTTCACTACAGCAGCCACCCAATCCTGTCCATTCCCCCTCTAGTCAACAGCCATTGATGCCAGATGTTGGCAATTCTAAGATTGAAGAACAGCAGCAGCATCAGAATTTCCCTGATGATTCAACAATAGAATCTATTGCTAGCACTGGGATTGGCAAGAATCTCATAAATGAAGATGATTCAAAATCAGCATATACTGTAGATTCTCCTGCAGCAGTGTCTGCCTCTcttccagaatctgctcaaacttccagggatattgatttgtctcctggcCAACCATTACAATCTAATCAACCAACTGGCAACCTTGGTGTCATTGGAAGAAGAAATGGTGCTGAGCATGGAGCCATTGGTGATAATTTTAGTGGGTCGAATGTTAGTTCTGGTGGAGTGCGTGATCAATTATATAATTTGCAAATGCTTGAGGCAGCCCACTTCAAAATTCCACTACCCAAAGACTCGGAACGTCCCAGGACTTACACTCCTAAGCACCCAGCAATTACACCTCCCAGCTATCCTCAAGTACAGGCACCTATTGTTAATAATCCTGCTTTTTGGGAGAGGGTTGGTCTTGAACCATTTGGTACTGATACTCTGTTCTTTGCATTTTATTATCAACAGAATACTTACCAACAATATTTGGCTGCAAAGGAGTTAAAGAAGCAGTCTTGGAGATACCACCGAAAGGAACTTATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATGGTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATTATCTTGAAGATGATCTTCTTGTATAGAAGATGCCATCTGGGACACTGA 2598 0.4172 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVERNQDDFDEFDDVDELYSSLPLDKVETLEDLVTIPPGLSKVAPSLSLKNTLTVSASQSASASQTSEQADDTESQDSNSDIVAKTPPPKSGGISSATSTPVGNHATPVSVNISGHNLSGAPVAALPSSNSVRNVLENTNVTNSSSVNQSTSTKEEDINSFPSRRPSPSLSDATLLRDRNSLSNQATASVPLGSGNMVSSNVALGSVSSASEIAKRNIMGADDRLGSSGMVQPLVSPLSNRLILPQAAKANDGIVSVDSSTVNEAAAGRVFSPSGVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKYQQVQQGHSTLLNMPSLVGGNHKQFSAQQQNPLLQQFNSHGSSVSSQSGIGLGVQSTSLGGISSASLQQPPNPVHSPSSQQPLMPDVGNSKIEEQQQHQNFPDDSTIESIASTGIGKNLINEDDSKSAYTVDSPAAVSASLPESAQTSRDIDLSPGQPLQSNQPTGNLGVIGRRNGAEHGAIGDNFSGSNVSSGGVRDQLYNLQMLEAAHFKIPLPKDSERPRTYTPKHPAITPPSYPQVQAPIVNNPAFWERVGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKELMCTLISILQMMTCNMDGVKESRLNSLLSIIILKMIFLYRRCHLGH 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00384 865 PIRSF NOT_su_3_5 1 835 IPR012270 GO:0006355|GO:0030015
Gma16g00384 865 Coils Coil 41 61 - -
Gma16g00384 865 MobiDBLite consensus disorder prediction 661 693 - -
Gma16g00384 865 PANTHER BNAA10G16600D PROTEIN 1 818 - -
Gma16g00384 865 MobiDBLite consensus disorder prediction 349 384 - -
Gma16g00384 865 MobiDBLite consensus disorder prediction 661 700 - -
Gma16g00384 865 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Gma16g00384 865 PANTHER CCR4 NOT-RELATED 1 818 IPR040168 GO:0030015
Gma16g00384 865 Coils Coil 139 159 - -
Gma16g00384 865 MobiDBLite consensus disorder prediction 585 611 - -
Gma16g00384 865 Pfam NOT2 / NOT3 / NOT5 family 734 820 IPR007282 GO:0006355
Gma16g00384 865 MobiDBLite consensus disorder prediction 110 131 - -
Gma16g00384 865 MobiDBLite consensus disorder prediction 268 319 - -
Gma16g00384 865 Gene3D - 718 823 IPR038635 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00384 Gma-Chr16 4004968 4015315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00384 K12580 - gmx:100783415 1531.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01067 19 38704497 38724517 Gma16g00384 16 4004968 4015315 GST
Gma16g00384 16 4004968 4015315 Gma16g01391 16 32920788 32934240 PCT
Gma16g00384 16 4004968 4015315 Gma02g00644 02 6293433 6304735 PCT
Gma16g01391 16 32920788 32934240 Gma16g00384 16 4004968 4015315 PCT
Gma02g00644 02 6293433 6304735 Gma16g00384 16 4004968 4015315 PCT