Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00644 ATGGGAGCTAGTCGAAAGCTTCAGGGCGAGATTGATCGTGTTCTCAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGGTTTACGACACCGATAATGCCAACCAGAAGGAGAAGTTCGAGGCTGACCTGAAGAAGGAGATTAAGAAGCTGCAGAGGTACAGGGACCAGATTAAGACATGGATTCAGTCCAGTGAGATCAAAGACAAGAAGGTTAGTGCCTCATATGAGCAGGCTCTGGTGGATGCACGCAAGATTATTGAGCGTGAAATGGAAAGATTCAAGATCTGTGAGAAGGAGACAAAAACAAAAGCATTCTCCAAAGAAGGCTTAGGTCAACAGCCTAAAACTGATCCTAGAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGGGAGTTAGAAAATCAAATCGATAACTTTGAAGCTGAGCTTGAGGGACTTTCTGTCAAGAAAGGAAAGAACAGGCCACCCAGATTGACACATCTAGAAACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTTATCTTGAGGCTACTAGATAATGATGAACTAAGTCCAGAGGAGGTTAATGATGTCAAGGATTTCCTGGATGACTATGTAGACCGTAATCAGGAGGACTTTGAAGAATTTAGTGATGTTGATGAGCTATATAGTTCATTACCCTTAGACAAGGTGGAGTCAATTGAAGATATTGTTACAATTCCCCCTGGTCTTGCTAAGGTGGCACCTGTGCTTAGCTTGAAGCCTTCTGTGGTAGCATCAGCTTCAGCATCACAAACATCTGAGCAAGCTGATGATACAGCTTCCCAGGATAGCAATTCTGATATTGTTGCAGGAACTCCACCTCCTAAAAGTAGTATAGTTAGTCCTACTACTACAACACCAGCAGGGAATTTTTCTACTCCTGTTTCTATGAATGTTCCCATGCCTAACTTGTCGAGTCCACCAGCCATTGCGTCAGCCATGCCTGGTTCAAATTCTGTTCGGAGTTCCTTGGAGATTAGTAGTCCTGTCAATGCTTCATCTTTTGTAAATCAGTCTAGCACTATGAAGGAGGAAGAGATTAATAGTTTCCCTGGCCAAAGACCATCTCCATCACTTTCTGATGTTGCACTTGTAAGGAACATCAGCAGAAACAGCTTATCAAATCAAGCAACAAATAACATACCTCTTGTTTCTGGCAATATGGTTTCCAGCAATGGGCCCCTTGGTTCAGTCCCTTCAGCATCTGAAATAACCAAGAGAAACATATTGGTAGTTGATGATAGACTCGGAAGCAATGGGATGGTGCAGCCTCTTGTATCCCCTTTAAGTAATAGAATGATCATGCCTCAGGTTGCAAGGCCTAATGATGGAACTTCCTCAGTTGACTCTAGTAGTGTCAACGAAGCTGCAACTGTATCTGGGAGAGTTTTCTCCCCTTCTGCTGTTCCTGGCATGCAATGGAGACCTGGAAGCCCCTTCCAGAATCAGAATGATGTGGGTCAGATTCGTGGAAGAACTGAAATAGCTCCAGATCAAAGGGAAAGGTATTTGCAGAAGTTGCAGCAAGTGCAGCAACAAGGGCAAAGTGCCCTTCTTAATATGCCATCTTTTGTAGGAGGGAATTCTAAGCAGTTTTCTGCTCAGCAACAAAATCCTCTCTTACAGCAGTTCAATTCTCAAGGCTCATCTGTTGCTTCTCAATCTAGCGTGGGACTTGGAGGAGTCCAGTCACCAGGTCTTAGTGGTATTGCTTCCACCTCATTACCGCAGCCACCCAATTCTGTCCATTCCCCATCTAGCCAACAATCATTGCTATTAGTTGTTTCCAAAGATGCAGATGTTGGAAATTCTAAGGTTGACGAGCCACAACTACATATTTTTCCTGATGATTCGGGGACTGAGTCTACTGCTAGTACTGGGATTGGCAAAAATTTCGTGAATGAAGATGAATTGAAATCCACATATGCCGTAGATTCTCCTACAGGAGTACCTGCCTCTCTTCCAGAGCCTGCTCAGACTTCTAGAGATATTGATTTGTTTCCTGGCCAACCTTTACAACCAAATCAGCGTAGTGGTAACCTTGGTGTTATAGGAAGAAGTTTGACTGACCTTGGAGCCGTTGGTGACAACTTCAGTGCATCAACTGCTAATTCTGGCGGAGTTCGTGATCAATTATATAATTTGCAGATGCTTGAGGCAGCTCACCTCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATTGTTAATAATCCTGCTTTTTGGGAGAGAGTAGGTATTGAACAATATGGCACTGATACCCTGTTCTTTGCATTTTACTATCAACAGAACACTTACCAACAGTATATGGCTGCAAAAGAGCTAAAGAAGCAGTCTTGGAGATATCACCGGAAGTATAACACATGGTTTCAGCGGCATGAAGAGCCAAAAGTTGCAACAGATGAATATGAGCAAGGAACATATGTGTACTTTGATTTCCATATTGCAAATGATGATCTGCAACATGGGTGGTGTCAAAGAATCAAGACCGACTTCACCTTTGAATATAATTATCTTGAAGATGAGCCTATTGTCTAA 2664 0.4309 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKIIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVGELENQIDNFEAELEGLSVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVDRNQEDFEEFSDVDELYSSLPLDKVESIEDIVTIPPGLAKVAPVLSLKPSVVASASASQTSEQADDTASQDSNSDIVAGTPPPKSSIVSPTTTTPAGNFSTPVSMNVPMPNLSSPPAIASAMPGSNSVRSSLEISSPVNASSFVNQSSTMKEEEINSFPGQRPSPSLSDVALVRNISRNSLSNQATNNIPLVSGNMVSSNGPLGSVPSASEITKRNILVVDDRLGSNGMVQPLVSPLSNRMIMPQVARPNDGTSSVDSSSVNEAATVSGRVFSPSAVPGMQWRPGSPFQNQNDVGQIRGRTEIAPDQRERYLQKLQQVQQQGQSALLNMPSFVGGNSKQFSAQQQNPLLQQFNSQGSSVASQSSVGLGGVQSPGLSGIASTSLPQPPNSVHSPSSQQSLLLVVSKDADVGNSKVDEPQLHIFPDDSGTESTASTGIGKNFVNEDELKSTYAVDSPTGVPASLPEPAQTSRDIDLFPGQPLQPNQRSGNLGVIGRSLTDLGAVGDNFSASTANSGGVRDQLYNLQMLEAAHLKLPQPKDSERPRTYTPKHPTITPPSFPQVQAPIVNNPAFWERVGIEQYGTDTLFFAFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTDFTFEYNYLEDEPIV 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00644 887 Gene3D - 728 882 IPR038635 -
Gma02g00644 887 PANTHER BNAA10G16600D PROTEIN 1 885 - -
Gma02g00644 887 MobiDBLite consensus disorder prediction 627 653 - -
Gma02g00644 887 Coils Coil 41 61 - -
Gma02g00644 887 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Gma02g00644 887 MobiDBLite consensus disorder prediction 110 131 - -
Gma02g00644 887 PANTHER CCR4 NOT-RELATED 1 885 IPR040168 GO:0030015
Gma02g00644 887 Coils Coil 132 159 - -
Gma02g00644 887 MobiDBLite consensus disorder prediction 637 651 - -
Gma02g00644 887 PIRSF NOT_su_3_5 1 887 IPR012270 GO:0006355|GO:0030015
Gma02g00644 887 Pfam NOT2 / NOT3 / NOT5 family 744 881 IPR007282 GO:0006355
Gma02g00644 887 MobiDBLite consensus disorder prediction 269 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00644 Gma-Chr2 6293433 6304735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00644 K12580 - gmx:100780204 1661.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00644 02 6293433 6304735 Gma02g00644 02 6293433 6304735 ECH
Gma16g01391 16 32920788 32934240 Gma02g00644 02 6293433 6304735 GST
Gma19g01067 19 38704497 38724517 Gma02g00644 02 6293433 6304735 PCT
Gma16g00384 16 4004968 4015315 Gma02g00644 02 6293433 6304735 PCT
Gma02g00644 02 6293433 6304735 Gma19g01067 19 38704497 38724517 PCT
Gma02g00644 02 6293433 6304735 Gma16g00384 16 4004968 4015315 PCT