Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01391 ATGGGAGCGAGTCGAAAACTCCAAGGCGAGATTGATCGCGTTCTTAAGAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGGTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCGGACCTGAAGAAGGAGATTAAGAAGCTGCAGAGGTACAGGGACCAGATTAAGACTTGGATTCAGTCCAGTGAGATCAAAGACAAGAAGGTTAGTGCCTCATATGAGCAGGCTCTGGTGGATGCACGCAAGCTTATTGAGCGTGAAATGGAAAGATTCAAGATCTGTGAGAAGGAGACAAAGACAAAAGCATTCTCCAAAGAAGGCTTAGGTCAACAGCCTAAAACTGATCCTAGAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGGGAGTTAGAAAATCAGATTGATAACTTTGAAGCTGAGCTTGAAGGACTTTCTGTCAAGAAAGGAAAGAACAGGCCTCCCAGATTGACACATCTAGAAACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTTATCTTGAGGCTACTAGATAATGATGAACTAAGTCCAGAGCAGGTTAATGATGTCAAAGATTTCCTGGATGACTATGTAGACCGTAATCAGGACGACTTTGAAGAATTTAGTGATGTTGATGAGTTATATAGTTCATTACCCTTAGACAAGGTGGAGTCACTTGAAGATATTGTTACAATTCCCCCTGGTCCTGCTAAGGTGACACCTGTGCTTAGCTTGAAGCCTTCTGTGGCAGCTTCAGCTTCAGCATCACAAACATCTGAGCAAGCTGATGATACAGCTTCCCAGGATAGCAATTCTGATTTTGTCGCAAGAACTCCACCTCCTAAAAGTAGTATAGTTAGTCCTACTGCTACAACACCAGCAGGGAATTTTGCTACTCCTGTTTCTATGAATGTTCCTGTGCCTAACTTGTCGAGTCCACCAGCCATTGCATCAGTCATGCCTGGTTCAAATTCTGTTCAGAGTTCCTTGGAGATTAGTAGTCCTGTGGATGCTTCATCTTTTGTTAATCAGTCTAGCACTATGAAGGAGGAAGAGATTAATAGTTTCCCTGGTCAAAGACCATCTCCATCGCTTTCTGATGTTACACTCGTAAGGAACATCAGCAGAAACAGCGTATCAAATCAAGCAACAAATAGCATACCTCTTGCTTCTGGCAATATGGTTTCCAGCAATGGGCCCCTTGGTTCAGTGCCTTCTGCACCTGAAATAACCAAGAGAAACATATTGGTAGGTGATGATAGACTCGGAAGCAATGGGATGGTGCAGCCTCTTGTATCCCCTTTAAGTAATAGAATGATCATGCCTCAGGTTGCTAGGCCTAATGATGGAACTTCCTCAGTTGACTCTAGTAGTGTCAACGAAGCTGCAACTGTATCTGGGAGAGTGTTCTCCCCTTCTGCTGTTCCTGGCATGCAATGGAGATCTGGAAGCCCCTTCCAGAATCAGAATGATGTGGTTCAGGTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAGGTATTTGCAGAAGTTGCAGCAAGTGCAGCAACAAGGGCAAAGTGCCATTCTTAATATGCCATCTTTTGTAGCAGGGAATCCTAAGCAGTTTTCTGCTCAGCAACAAAATCCTCTCTTACAGCAGTTCAATTCTCAAGGCTCATCTGTTGCATCTCAATCTGGTGTGGGACTTGGAGTCCAGTCACCAGGTCTTAGTGGTATTGCTTCCACCTCATTACCGCAGCCACCAAATTCTGTCCATTCCCCATCTAGTCAACAGTCATTGCTATTAGTTGTTTCCAAAGATGCAGatgttggcaattctaagggtgacgagccacaacaacagatttttcctgatgattcaGGGACTGAATCTACTGCTAGTAATGGGATTGGCAAGAATTTTGTGAATGAAGATGAATTGAAATCCACATATGCTGTAGATTCTCCTGCTGGAGTACCTGCCTCTCTTCCTGAGCCTGCTCAGACTTCTAGAGATATTGATTTGTCTCCTGGCCTACCTTTACAATCAAATCAGCGTACTGGTAACCTTGGTGTTATAGGAAGAAGTTCAACTGACCTTGGAGCTCTTGGTGACAACTTCAGTGCATCAACTGCTAATTCTGGCGGAGTTCGTGATCAATTATATTATTTACAGATGCTTGAGGCAGCCCACCTCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATTGTTAATAATCCTGCTTTTTGGGAGAGAGTAGGTATCGAACAATATGGCACTGATACCCTGTTCTTTGCATTTTACTATCAACAGAACACTTACCAACAGTATATGGCTGCAAAAGAGCTAAAGAAGCAGTCTTGGAGATATCACCGGAAGTATAACACATGGTTTCAACGGCATGAAGAGCCAAAAGTTGCAACAGATGAATATGAGCAGGGAACGTATGTGTACTTTGATTTCCATATTGCAAATGATGATCTGCAGCATGGCTGGTGTCAAAGAATCAAGACCGACTTCACCTTTGAATATAACTATCTTGAAGATGAGCCTATTGTCTAG 2661 0.4258 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVGELENQIDNFEAELEGLSVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVDRNQDDFEEFSDVDELYSSLPLDKVESLEDIVTIPPGPAKVTPVLSLKPSVAASASASQTSEQADDTASQDSNSDFVARTPPPKSSIVSPTATTPAGNFATPVSMNVPVPNLSSPPAIASVMPGSNSVQSSLEISSPVDASSFVNQSSTMKEEEINSFPGQRPSPSLSDVTLVRNISRNSVSNQATNSIPLASGNMVSSNGPLGSVPSAPEITKRNILVGDDRLGSNGMVQPLVSPLSNRMIMPQVARPNDGTSSVDSSSVNEAATVSGRVFSPSAVPGMQWRSGSPFQNQNDVVQVRGRTEIAPDQRERYLQKLQQVQQQGQSAILNMPSFVAGNPKQFSAQQQNPLLQQFNSQGSSVASQSGVGLGVQSPGLSGIASTSLPQPPNSVHSPSSQQSLLLVVSKDADVGNSKGDEPQQQIFPDDSGTESTASNGIGKNFVNEDELKSTYAVDSPAGVPASLPEPAQTSRDIDLSPGLPLQSNQRTGNLGVIGRSSTDLGALGDNFSASTANSGGVRDQLYYLQMLEAAHLKLPQPKDSERPRTYTPKHPTITPPSFPQVQAPIVNNPAFWERVGIEQYGTDTLFFAFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTDFTFEYNYLEDEPIV 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01391 886 Coils Coil 41 61 - -
Gma16g01391 886 MobiDBLite consensus disorder prediction 665 701 - -
Gma16g01391 886 Gene3D - 727 881 IPR038635 -
Gma16g01391 886 PANTHER BNAA10G16600D PROTEIN 1 884 - -
Gma16g01391 886 PIRSF NOT_su_3_5 1 886 IPR012270 GO:0006355|GO:0030015
Gma16g01391 886 MobiDBLite consensus disorder prediction 686 701 - -
Gma16g01391 886 PANTHER CCR4 NOT-RELATED 1 884 IPR040168 GO:0030015
Gma16g01391 886 MobiDBLite consensus disorder prediction 589 652 - -
Gma16g01391 886 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Gma16g01391 886 MobiDBLite consensus disorder prediction 748 770 - -
Gma16g01391 886 MobiDBLite consensus disorder prediction 110 131 - -
Gma16g01391 886 Coils Coil 132 159 - -
Gma16g01391 886 Pfam NOT2 / NOT3 / NOT5 family 743 880 IPR007282 GO:0006355
Gma16g01391 886 MobiDBLite consensus disorder prediction 625 650 - -
Gma16g01391 886 MobiDBLite consensus disorder prediction 268 306 - -
Gma16g01391 886 MobiDBLite consensus disorder prediction 589 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01391 Gma-Chr16 32920788 32934240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01391 K12580 - gmx:100819202 1674.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01391 16 32920788 32934240 Gma02g00644 02 6293433 6304735 GST
Gma19g01067 19 38704497 38724517 Gma16g01391 16 32920788 32934240 PCT
Gma16g00384 16 4004968 4015315 Gma16g01391 16 32920788 32934240 PCT
Gma16g01391 16 32920788 32934240 Gma19g01067 19 38704497 38724517 PCT
Gma16g01391 16 32920788 32934240 Gma16g00384 16 4004968 4015315 PCT