Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00818 ATGGAACCTCACGCGAGTTCCTTCGTGTCCAAGGCGCGAACCGCGTTCCATTCCGCAGCCGCGAAAGCGGAGCGTGTTCTCACGGACTTCAAAATCGATCTAGGTATAGGAACAAAGCAGGACTGGCAAGATAGAATAAACAACATACGGAAAGGGAGAAAGGAAGTTGAAGTAACAGATAAAGTTGGCGATGTAAACGTGGGCTCTGTTCCATTTTATGATGAAAATTTGTACATCCTCAATGTGAAAAATGATCTTGATGCCAAGGCTTCAGAAGCAATTCCCACGGTTGAAGGCTTAACTGCTGCGACCAAACATCCCATTCCTCCATCATCTGTCCTGAAGCAGTTGGCTATAGCTATTGAGGCTGGAAGGCAAACAAACTCAATGAAAGATTTTGTAGCTTCATCACCTGCCAGAGAGAAGGCAGGCTTAAGTATCTCTTCAGTGAAGGCTTTAGTGTTGCGTGAAAAGGAGGACAAACTCACCTCTGAGTTTAGTAGCGATGAGAAAGTTGTGTATTTGATTAATTCATTGTTTGACCAAGAGGGAGAGTTCCTTAGAAGGAAGATCAACTCTGATCCAGAGGAAACTTCCATATCATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTAGTTGTTAAGCTAGCCGAAGTAATCGGAAACTTCAAGACGCTTCGAGGAATGTCTCTTTTTTGGTCCAGGGTTGTTGATGAACTGAGAAAACATTGGTCTGAAGAAAAACATTTACTTGGAGTCCCCCCAGATGACATTCCAGATCTGAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGTATCTCTCGCAAAAGGCGCCATATTATTGCCATTGAATCTCTGGACTCTATGGTGATGGAAGCCAATTCAAATACATCAGACTCAGCGAACTACATGGGCAGAATTCCTACAAGCCCTTTATTATATGCAAGATTAAGAACTGGAGAGCTTGTTCTCCGTCTTGGTGCTGATTGCCCATCTGGAGATCTGACGTTACTGGAGACTGGCGAGCCTGCATACTCTCCTGTCACCCAGGAGGGACCCTTGCTTACAGAAGATCTGATCAAAGAGACAGAGGAGTTTGTGCTGCGGACAGGAAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTACTCGCCTCCTGATTGGATGGAAAGTGAGGGAAGTACTGAAGACAGAGATTCTTTTTATGGTGGTGAGTCAATGTCTAGCAGAGGTCAACTAAGTTTGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAATCAGTTCCAGCTGTTAAACAGACACCTCTCTATGATGAGGATTTAGCAGTGGAGGGCATTCTAGATGCATTTGAGGACATCCAGCCTTCAGAGCTTTACAGACAGCTGTTTGTTTCTCTTCTCGGTTTAGGATTTGCAATTGCTGAAACTATGCTGTCTGGCGACATTGACACCTCAAAGTTGTTCAATGATTGCAAGGAGTACATAGTTACCACTTCTCAAAGTGACGGATTCCATGAGAAAGTCAATGAACTTGTTCAGATGTATGAAACGGTGGAGAAAATGTTGCTGAATCCAGACAAGGCACTGAAGATGATGAAGCACATGGAAGAATCAACTATGActactgatgaaccaaagcgcaggttttctactggtgagccaaagcaccggtttAAGCGATTTAGCCATATCTTTGGTGGCAAAGATAAACTGTTGACGCCTGTCAGGAAAGATGAGGTAAACGATGAAGAAAAGCAGATTCGATATTCTTTCTCAAGTTTCTTTGACAGCAAGTCATCTTTATTTTCAAAGAAGCCTCCTAAGCCTGGAAACCTATACCCTGCCTTGCTTGTTGGGGAGGGCTTGTACAAGGATGATCAATCAAAATAA 1989 0.4213 MEPHASSFVSKARTAFHSAAAKAERVLTDFKIDLGIGTKQDWQDRINNIRKGRKEVEVTDKVGDVNVGSVPFYDENLYILNVKNDLDAKASEAIPTVEGLTAATKHPIPPSSVLKQLAIAIEAGRQTNSMKDFVASSPAREKAGLSISSVKALVLREKEDKLTSEFSSDEKVVYLINSLFDQEGEFLRRKINSDPEETSISSLPRDIHGAPPESLVVKLAEVIGNFKTLRGMSLFWSRVVDELRKHWSEEKHLLGVPPDDIPDLKSCLLYQQFQVINCCISRKRRHIIAIESLDSMVMEANSNTSDSANYMGRIPTSPLLYARLRTGELVLRLGADCPSGDLTLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWMESEGSTEDRDSFYGGESMSSRGQLSLRMQKEGNLWRELWETSKSVPAVKQTPLYDEDLAVEGILDAFEDIQPSELYRQLFVSLLGLGFAIAETMLSGDIDTSKLFNDCKEYIVTTSQSDGFHEKVNELVQMYETVEKMLLNPDKALKMMKHMEESTMTTDEPKRRFSTGEPKHRFKRFSHIFGGKDKLLTPVRKDEVNDEEKQIRYSFSSFFDSKSSLFSKKPPKPGNLYPALLVGEGLYKDDQSK 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00818 662 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 35 648 IPR045700 GO:0005096|GO:0043547
Gma18g00818 662 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 34 IPR045700 GO:0005096|GO:0043547
Gma18g00818 662 Pfam Rab3 GTPase-activating protein catalytic subunit 332 484 IPR026147 -
Gma18g00818 662 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 35 648 - -
Gma18g00818 662 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00818 Gma-Chr18 9387604 9396371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00818 K18270 - gmx:100788608 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00818 18 9387604 9396371 Gma18g00818 18 9387604 9396371 ECH
Gma18g00818 18 9387604 9396371 Gma08g02983 08 46392606 46400630 GST
Gma18g00818 18 9387604 9396371 Gma14g00193 14 1609630 1617767 PCT
Gma18g00818 18 9387604 9396371 Gma02g02744 02 53120519 53127927 PCT
Gma14g00193 14 1609630 1617767 Gma18g00818 18 9387604 9396371 PCT
Gma02g02744 02 53120519 53127927 Gma18g00818 18 9387604 9396371 PCT